Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

LOC100037907 protein

Gene

LOC100037907

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_212136. A tetrasaccharide linker sequence is required for GAG synthesis.

Protein family/group databases

CAZyiGT43. Glycosyltransferase Family 43.

Names & Taxonomyi

Protein namesi
Submitted name:
LOC100037907 proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:LOC100037907Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
ProteomesiUP000008143: Unplaced

Organism-specific databases

XenbaseiXB-GENE-961613.

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000018256.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG310844.
GeneTreeiENSGT00390000017640.
HOGENOMiHOG000261693.
HOVERGENiHBG050650.
KOiK00735.
OMAiHENGPAT.
OrthoDBiEOG7QG44X.
TreeFamiTF313522.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR005027. Glyco_trans_43.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PANTHERiPTHR10896. PTHR10896. 1 hit.
PfamiPF03360. Glyco_transf_43. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.

Sequencei

Sequence statusi: Complete.

A4IGU2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNEEHWGQP TLEMLKRRDI LAIVLIVLPW TLLITVWHHS TLSPLLTAHK
60 70 80 90 100
EDGSEGRRDV SQGSDSREYC SSDRDIVEVV RTEYVYTRPP PWMGNLPIIH
110 120 130 140 150
VITPTYSRPV QKAELTRLSN TLLHVPNLHW ILVEDSQRRT PLVTRLLQDS
160 170 180 190 200
GLNYTHLNVE TPRNYKLRGD TRDPRIPRGT MQRNLALRWL RETFNRNNSL
210 220 230 240 250
PGVVYFADDD NTYSLDLFEE MRSTRKVSVW PVAFVGGLRY ESPKVNAAGK
260 270 280 290 300
VFGWKTVFDP HRPFAIDMAG FAINLRLILQ RPQAYFKLRG VKGGYQESSL
310 320 330 340
LRELVTLNDL EPKADNCTKI LVWHTRTEKP VLVNEGKKGF TDPNVEI
Length:347
Mass (Da):39,989
Last modified:May 1, 2007 - v1
Checksum:i3EEB823C3BF44A99
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01075613 Genomic DNA. No translation available.
AAMC01075614 Genomic DNA. No translation available.
AAMC01075615 Genomic DNA. No translation available.
AAMC01075616 Genomic DNA. No translation available.
AAMC01075617 Genomic DNA. No translation available.
AAMC01075618 Genomic DNA. No translation available.
AAMC01075619 Genomic DNA. No translation available.
AAMC01075620 Genomic DNA. No translation available.
AAMC01075621 Genomic DNA. No translation available.
BC135247 mRNA. Translation: AAI35248.1.
RefSeqiNP_001090809.1. NM_001097340.1.
UniGeneiStr.40135.

Genome annotation databases

EnsembliENSXETT00000018256; ENSXETP00000018256; ENSXETG00000008325.
GeneIDi100037907.
KEGGixtr:100037907.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01075613 Genomic DNA. No translation available.
AAMC01075614 Genomic DNA. No translation available.
AAMC01075615 Genomic DNA. No translation available.
AAMC01075616 Genomic DNA. No translation available.
AAMC01075617 Genomic DNA. No translation available.
AAMC01075618 Genomic DNA. No translation available.
AAMC01075619 Genomic DNA. No translation available.
AAMC01075620 Genomic DNA. No translation available.
AAMC01075621 Genomic DNA. No translation available.
BC135247 mRNA. Translation: AAI35248.1.
RefSeqiNP_001090809.1. NM_001097340.1.
UniGeneiStr.40135.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000018256.

Protein family/group databases

CAZyiGT43. Glycosyltransferase Family 43.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSXETT00000018256; ENSXETP00000018256; ENSXETG00000008325.
GeneIDi100037907.
KEGGixtr:100037907.

Organism-specific databases

XenbaseiXB-GENE-961613.

Phylogenomic databases

eggNOGiNOG310844.
GeneTreeiENSGT00390000017640.
HOGENOMiHOG000261693.
HOVERGENiHBG050650.
KOiK00735.
OMAiHENGPAT.
OrthoDBiEOG7QG44X.
TreeFamiTF313522.

Enzyme and pathway databases

ReactomeiREACT_212136. A tetrasaccharide linker sequence is required for GAG synthesis.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR005027. Glyco_trans_43.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PANTHERiPTHR10896. PTHR10896. 1 hit.
PfamiPF03360. Glyco_transf_43. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Whole embryoImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiA4IGU2_XENTR
AccessioniPrimary (citable) accession number: A4IGU2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: March 4, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.