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A4IGU2

- A4IGU2_XENTR

UniProt

A4IGU2 - A4IGU2_XENTR

Protein
Submitted name:

LOC100037907 protein

Gene

LOC100037907

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (01 May 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity Source: InterPro

    Enzyme and pathway databases

    ReactomeiREACT_212136. A tetrasaccharide linker sequence is required for GAG synthesis.

    Protein family/group databases

    CAZyiGT43. Glycosyltransferase Family 43.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    LOC100037907 proteinImported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:LOC100037907Imported
    OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
    Taxonomic identifieri8364 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
    ProteomesiUP000008143: Unplaced

    Organism-specific databases

    XenbaseiXB-GENE-961613.

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi8364.ENSXETP00000018256.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG310844.
    GeneTreeiENSGT00390000017640.
    HOGENOMiHOG000261693.
    HOVERGENiHBG050650.
    KOiK00735.
    OMAiEMRSTRK.
    OrthoDBiEOG7QG44X.
    TreeFamiTF313522.

    Family and domain databases

    Gene3Di3.90.550.10. 1 hit.
    InterProiIPR005027. Glyco_trans_43.
    IPR029044. Nucleotide-diphossugar_trans.
    [Graphical view]
    PANTHERiPTHR10896. PTHR10896. 1 hit.
    PfamiPF03360. Glyco_transf_43. 1 hit.
    [Graphical view]
    SUPFAMiSSF53448. SSF53448. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A4IGU2-1 [UniParc]FASTAAdd to Basket

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    MGNEEHWGQP TLEMLKRRDI LAIVLIVLPW TLLITVWHHS TLSPLLTAHK    50
    EDGSEGRRDV SQGSDSREYC SSDRDIVEVV RTEYVYTRPP PWMGNLPIIH 100
    VITPTYSRPV QKAELTRLSN TLLHVPNLHW ILVEDSQRRT PLVTRLLQDS 150
    GLNYTHLNVE TPRNYKLRGD TRDPRIPRGT MQRNLALRWL RETFNRNNSL 200
    PGVVYFADDD NTYSLDLFEE MRSTRKVSVW PVAFVGGLRY ESPKVNAAGK 250
    VFGWKTVFDP HRPFAIDMAG FAINLRLILQ RPQAYFKLRG VKGGYQESSL 300
    LRELVTLNDL EPKADNCTKI LVWHTRTEKP VLVNEGKKGF TDPNVEI 347
    Length:347
    Mass (Da):39,989
    Last modified:May 1, 2007 - v1
    Checksum:i3EEB823C3BF44A99
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAMC01075613 Genomic DNA. No translation available.
    AAMC01075614 Genomic DNA. No translation available.
    AAMC01075615 Genomic DNA. No translation available.
    AAMC01075616 Genomic DNA. No translation available.
    AAMC01075617 Genomic DNA. No translation available.
    AAMC01075618 Genomic DNA. No translation available.
    AAMC01075619 Genomic DNA. No translation available.
    AAMC01075620 Genomic DNA. No translation available.
    AAMC01075621 Genomic DNA. No translation available.
    BC135247 mRNA. Translation: AAI35248.1.
    RefSeqiNP_001090809.1. NM_001097340.1.
    UniGeneiStr.40135.

    Genome annotation databases

    EnsembliENSXETT00000018256; ENSXETP00000018256; ENSXETG00000008325.
    GeneIDi100037907.
    KEGGixtr:100037907.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAMC01075613 Genomic DNA. No translation available.
    AAMC01075614 Genomic DNA. No translation available.
    AAMC01075615 Genomic DNA. No translation available.
    AAMC01075616 Genomic DNA. No translation available.
    AAMC01075617 Genomic DNA. No translation available.
    AAMC01075618 Genomic DNA. No translation available.
    AAMC01075619 Genomic DNA. No translation available.
    AAMC01075620 Genomic DNA. No translation available.
    AAMC01075621 Genomic DNA. No translation available.
    BC135247 mRNA. Translation: AAI35248.1 .
    RefSeqi NP_001090809.1. NM_001097340.1.
    UniGenei Str.40135.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 8364.ENSXETP00000018256.

    Protein family/group databases

    CAZyi GT43. Glycosyltransferase Family 43.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSXETT00000018256 ; ENSXETP00000018256 ; ENSXETG00000008325 .
    GeneIDi 100037907.
    KEGGi xtr:100037907.

    Organism-specific databases

    Xenbasei XB-GENE-961613.

    Phylogenomic databases

    eggNOGi NOG310844.
    GeneTreei ENSGT00390000017640.
    HOGENOMi HOG000261693.
    HOVERGENi HBG050650.
    KOi K00735.
    OMAi EMRSTRK.
    OrthoDBi EOG7QG44X.
    TreeFami TF313522.

    Enzyme and pathway databases

    Reactomei REACT_212136. A tetrasaccharide linker sequence is required for GAG synthesis.

    Family and domain databases

    Gene3Di 3.90.550.10. 1 hit.
    InterProi IPR005027. Glyco_trans_43.
    IPR029044. Nucleotide-diphossugar_trans.
    [Graphical view ]
    PANTHERi PTHR10896. PTHR10896. 1 hit.
    Pfami PF03360. Glyco_transf_43. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53448. SSF53448. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. NIH - Xenopus Gene Collection (XGC) project
      Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Whole embryoImported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. Ensembl
      Submitted (JUN-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiA4IGU2_XENTR
    AccessioniPrimary (citable) accession number: A4IGU2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 2007
    Last sequence update: May 1, 2007
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3