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A4IGU2

- A4IGU2_XENTR

UniProt

A4IGU2 - A4IGU2_XENTR

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Protein
Submitted name:

LOC100037907 protein

Gene
LOC100037907
Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_212136. A tetrasaccharide linker sequence is required for GAG synthesis.

Protein family/group databases

CAZyiGT43. Glycosyltransferase Family 43.

Names & Taxonomyi

Protein namesi
Submitted name:
LOC100037907 proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:LOC100037907Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
ProteomesiUP000008143: Unassembled WGS sequence, UP000008143: Unplaced

Organism-specific databases

XenbaseiXB-GENE-961613.

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000018256.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG310844.
GeneTreeiENSGT00390000017640.
HOGENOMiHOG000261693.
HOVERGENiHBG050650.
KOiK00735.
OMAiEMRSTRK.
OrthoDBiEOG7QG44X.
TreeFamiTF313522.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR005027. Glyco_trans_43.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PANTHERiPTHR10896. PTHR10896. 1 hit.
PfamiPF03360. Glyco_transf_43. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.

Sequencei

Sequence statusi: Complete.

A4IGU2-1 [UniParc]FASTAAdd to Basket

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MGNEEHWGQP TLEMLKRRDI LAIVLIVLPW TLLITVWHHS TLSPLLTAHK    50
EDGSEGRRDV SQGSDSREYC SSDRDIVEVV RTEYVYTRPP PWMGNLPIIH 100
VITPTYSRPV QKAELTRLSN TLLHVPNLHW ILVEDSQRRT PLVTRLLQDS 150
GLNYTHLNVE TPRNYKLRGD TRDPRIPRGT MQRNLALRWL RETFNRNNSL 200
PGVVYFADDD NTYSLDLFEE MRSTRKVSVW PVAFVGGLRY ESPKVNAAGK 250
VFGWKTVFDP HRPFAIDMAG FAINLRLILQ RPQAYFKLRG VKGGYQESSL 300
LRELVTLNDL EPKADNCTKI LVWHTRTEKP VLVNEGKKGF TDPNVEI 347
Length:347
Mass (Da):39,989
Last modified:May 1, 2007 - v1
Checksum:i3EEB823C3BF44A99
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAMC01075613 Genomic DNA. No translation available.
AAMC01075614 Genomic DNA. No translation available.
AAMC01075615 Genomic DNA. No translation available.
AAMC01075616 Genomic DNA. No translation available.
AAMC01075617 Genomic DNA. No translation available.
AAMC01075618 Genomic DNA. No translation available.
AAMC01075619 Genomic DNA. No translation available.
AAMC01075620 Genomic DNA. No translation available.
AAMC01075621 Genomic DNA. No translation available.
BC135247 mRNA. Translation: AAI35248.1.
RefSeqiNP_001090809.1. NM_001097340.1.
UniGeneiStr.40135.

Genome annotation databases

EnsembliENSXETT00000018256; ENSXETP00000018256; ENSXETG00000008325.
GeneIDi100037907.
KEGGixtr:100037907.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAMC01075613 Genomic DNA. No translation available.
AAMC01075614 Genomic DNA. No translation available.
AAMC01075615 Genomic DNA. No translation available.
AAMC01075616 Genomic DNA. No translation available.
AAMC01075617 Genomic DNA. No translation available.
AAMC01075618 Genomic DNA. No translation available.
AAMC01075619 Genomic DNA. No translation available.
AAMC01075620 Genomic DNA. No translation available.
AAMC01075621 Genomic DNA. No translation available.
BC135247 mRNA. Translation: AAI35248.1 .
RefSeqi NP_001090809.1. NM_001097340.1.
UniGenei Str.40135.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 8364.ENSXETP00000018256.

Protein family/group databases

CAZyi GT43. Glycosyltransferase Family 43.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSXETT00000018256 ; ENSXETP00000018256 ; ENSXETG00000008325 .
GeneIDi 100037907.
KEGGi xtr:100037907.

Organism-specific databases

Xenbasei XB-GENE-961613.

Phylogenomic databases

eggNOGi NOG310844.
GeneTreei ENSGT00390000017640.
HOGENOMi HOG000261693.
HOVERGENi HBG050650.
KOi K00735.
OMAi EMRSTRK.
OrthoDBi EOG7QG44X.
TreeFami TF313522.

Enzyme and pathway databases

Reactomei REACT_212136. A tetrasaccharide linker sequence is required for GAG synthesis.

Family and domain databases

Gene3Di 3.90.550.10. 1 hit.
InterProi IPR005027. Glyco_trans_43.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view ]
PANTHERi PTHR10896. PTHR10896. 1 hit.
Pfami PF03360. Glyco_transf_43. 1 hit.
[Graphical view ]
SUPFAMi SSF53448. SSF53448. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Whole embryoImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiA4IGU2_XENTR
AccessioniPrimary (citable) accession number: A4IGU2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: September 3, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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