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A4IFC8 (A4IFC8_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length916 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
A4IFC8 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: 703226C6B9D7594B

FASTA916101,316
        10         20         30         40         50         60 
MQRSIMSFFQ PKKEGKAKKP EKETAKSIRE TESPPKVALK ERNRVVSEGD SPVKRPGRKA 

        70         80         90        100        110        120 
TRVLGSEGEE EEEEAPTTPR SQKPASDSPQ ASPPSPVTLP ESSPSHSKPS PAVASPSGIP 

       130        140        150        160        170        180 
KRRTARKQLP KRTFQDVLKE QGEDKDPETK KKKEEEAETP IESLPEPEGD DKEEVEGGDQ 

       190        200        210        220        230        240 
PTTPPEPRKT STESLTESVS EPGVTVKQEP QEDGQAQPPP KTPKTLSSFF SPRKPAVKKE 

       250        260        270        280        290        300 
AKEEGPGALR KDEIKGHVDP ASYNPAKNNY HPIEDACWKA GQRVPYLAVA RAFEKIEEVS 

       310        320        330        340        350        360 
ARLRMVETLS NLLRSVVALS PADLLPVLYL SLNRLGPPQQ GLELGIGEGI LLKAVAQATG 

       370        380        390        400        410        420 
RQLESVRAEV AEKGDVGLVA ESSRSTQRLV LPPPALTAAG VFAKFRDIAQ LAGSASTTKK 

       430        440        450        460        470        480 
IDVIKGLFVA CRHSEARFIA RALSGRLRLG LAEQSVLAAL AQAVSLTPPS QECPPAVVDA 

       490        500        510        520        530        540 
GKGKTAEARK TWLEEQGMIL KQTFCEVPDL ERIVPVLLEH GLERLPEHCR LSPGVPLKPM 

       550        560        570        580        590        600 
LAHPTRGVSE VLKRFEEAAF TCEYKYDGQR AQIHVLEGGE VKIFSRNQED NTGRYPDIIS 

       610        620        630        640        650        660 
RIPKIKLPSV TSFILDTEAV AWDREKKQIQ PFQVLTTRKR KEVDAAEIQV QVCLYAFDLI 

       670        680        690        700        710        720 
YLNGKSLVRE PLSRRRQLLR ENFVETEGEF VFATSLDTKD TEQIAEFLEQ SVKDSCEGLM 

       730        740        750        760        770        780 
VKTLDVDATY EIAKRSHNWL KLKKDYLEGV GDTLDLVVIG AYLGKGKRAG RYGGFLLASY 

       790        800        810        820        830        840 
DEESEEFQAI CKLGTGFSDE ELEEHHQRLQ ALVLPTPRSY VRADGAVAPD HWLDPSDVWE 

       850        860        870        880        890        900 
VKCADLSLSP IYPAARGLVD SEKGISLRFP RFIRVREDKK PEQATTSAQV AGLYKKQSQI 

       910 
QNQQGAEPDS EQEEFY 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DAAA02047435 Genomic DNA. No translation available.
BC134518 mRNA. Translation: AAI34519.1.
RefSeqNP_001096018.1. NM_001102548.1.
UniGeneBt.12876.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9913.ENSBTAP00000019427.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000031920; ENSBTAP00000031866; ENSBTAG00000014595.
GeneID100124507.
KEGGbta:100124507.

Organism-specific databases

CTD3978.

Phylogenomic databases

eggNOGCOG1793.
GeneTreeENSGT00750000117745.
HOGENOMHOG000036006.
HOVERGENHBG005514.
KOK10747.
OMADKGGPSE.
OrthoDBEOG7RFTGN.
TreeFamTF300342.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20788728.

Entry information

Entry nameA4IFC8_BOVIN
AccessionPrimary (citable) accession number: A4IFC8
Secondary accession number(s): F1MSC6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: April 16, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)