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Protein
Submitted name:

Putative DNA ligase

Gene

LINJ_26_1330

Organism
Leishmania infantum
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:LINJ_26_1330Imported
OrganismiLeishmania infantumImported
Taxonomic identifieri5671 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
ProteomesiUP000008153 Componenti: Chromosome 26

Interactioni

Protein-protein interaction databases

STRINGi5671.LinJ26.1310.

Structurei

3D structure databases

ProteinModelPortaliA4I264.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
InParanoidiA4I264.
KOiK10747.
OMAiLECCHGL.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4I264-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQTPSNVSPV CMKMAVWRCS HCLQEFEMVV GHFIDGGGVC PHCHSPQKKL
60 70 80 90 100
DNVTVRNAQG ELVTKKPQYV KAPRMIHSNY RSVLFANPHW ESLNIQPMLA
110 120 130 140 150
QRWELVADEL MKSSNGESGT ASDKHLLLAS PKIDGIRCMI GYNEKLREVQ
160 170 180 190 200
FFSRGGIVLE CCHGLVPQLL PLFEKDPTLM LDGELFAPEC NFEQLNGLVR
210 220 230 240 250
RLNKKSDPKI MEAQARLLEY FAFDIMYSAQ LSSVSAPFDE RYMLLKKLIP
260 270 280 290 300
VCGAKRISNY VHDDTRKKVI RATHGGVATA AAANGQAVKI YHVPAAQVHP
310 320 330 340 350
SDMEDVLNEA CSQGFEGVMI RLPKFPYEHG KRSFGLLKYK QMHDAEFKIV
360 370 380 390 400
GFVPGEGKFK SALGAFVCTT KDGKHFNTPP KVSCKHRIEL WEHRREYLGK
410 420 430
YLTVQYQELS SQNVPRFPIA KAIRGSEDKR DWL
Length:433
Mass (Da):48,953
Last modified:April 30, 2007 - v1
Checksum:i1B3611F49C7C9522
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796458 Genomic DNA. Translation: CAM68851.1.
RefSeqiXP_001470475.1. XM_001470438.1.

Genome annotation databases

GeneIDi5069847.
KEGGilif:LINJ_26_1330.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796458 Genomic DNA. Translation: CAM68851.1.
RefSeqiXP_001470475.1. XM_001470438.1.

3D structure databases

ProteinModelPortaliA4I264.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5671.LinJ26.1310.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5069847.
KEGGilif:LINJ_26_1330.

Phylogenomic databases

eggNOGiCOG1793.
InParanoidiA4I264.
KOiK10747.
OMAiLECCHGL.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JPCM5Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JPCM5Imported.

Entry informationi

Entry nameiA4I264_LEIIN
AccessioniPrimary (citable) accession number: A4I264
Entry historyi
Integrated into UniProtKB/TrEMBL: April 30, 2007
Last sequence update: April 30, 2007
Last modified: March 3, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.