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Protein
Submitted name:

Putative histone deacetylase

Gene

LINJ_24_1410

Organism
Leishmania infantum
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative histone deacetylaseImported
Gene namesi
ORF Names:LINJ_24_1410Imported
OrganismiLeishmania infantumImported
Taxonomic identifieri5671 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
ProteomesiUP000008153 Componenti: Chromosome 24

Interactioni

Protein-protein interaction databases

STRINGi435258.XP_001465967.1.

Structurei

3D structure databases

ProteinModelPortaliA4I0X6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0123.
InParanoidiA4I0X6.
KOiK06067.
OMAiCHARPAT.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.
PR01271. HISDACETLASE.

Sequencei

Sequence statusi: Complete.

A4I0X6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTPEQLPAL SAAGSPSSGG ASSHHSPHEA SLSFPASVIP GDASAESPRA
60 70 80 90 100
WSMPRSSTAS EESAATSQLQ QKPDAPESRL GGRKVVYFVD HSVTSIAYAE
110 120 130 140 150
GHLMRPSRVR ALHALVHSLG LDNAECMTVC HARPATAEEM GAFHRSAYLE
160 170 180 190 200
CLRQAPVICG NPLDEMSLAF QKEFDVPFAS QNGDCPLFPE VWALVSSQAG
210 220 230 240 250
ASLACAEALV RGDATVAMNW AGGMHHAAAA HASGFCFVND IVLCIRRLLR
260 270 280 290 300
HYQRVLYVDL DVHHGDGVEG AFYGNHRVMT LSLHQFGNGF FPGTGDYPTR
310 320 330 340 350
ETADSFAINV PLPTRTGDAA YLLSFRTALS SVVQCFDPEA MVVQCGADTI
360 370 380 390 400
AGDLIGRLCV TTLAHTQCVA DVLSLERPTV LLGGGGYHVF HTARCWAIHT
410 420 430 440 450
ATALGRTAAQ LPLYIPRTDP YYMDYRRECT PKRPTLHVFL DPDVDDPLPL
460 470 480 490 500
GDSLAFWRQL CRSIQWQMRA ARLVRQGFFR TLQLCRQRRA ALLRQFATQE
510 520 530
AGRESGIGVS GPKRPRSANA TDRDAKEGVE DRVVSA
Length:536
Mass (Da):58,127
Last modified:May 1, 2007 - v1
Checksum:i28DEB24A4A029B71
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796456 Genomic DNA. Translation: CAM68400.1.
RefSeqiXP_001465967.1. XM_001465930.1.

Genome annotation databases

GeneIDi5069396.
KEGGilif:LINJ_24_1410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796456 Genomic DNA. Translation: CAM68400.1.
RefSeqiXP_001465967.1. XM_001465930.1.

3D structure databases

ProteinModelPortaliA4I0X6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi435258.XP_001465967.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5069396.
KEGGilif:LINJ_24_1410.

Phylogenomic databases

eggNOGiCOG0123.
InParanoidiA4I0X6.
KOiK06067.
OMAiCHARPAT.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.
PR01271. HISDACETLASE.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JPCM5Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JPCM5Imported.

Entry informationi

Entry nameiA4I0X6_LEIIN
AccessioniPrimary (citable) accession number: A4I0X6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: June 24, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.