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Protein
Submitted name:

Putative DNA ligase

Gene

LBRM_26_1370

Organism
Leishmania braziliensis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:LBRM_26_1370Imported
OrganismiLeishmania braziliensisImported
Taxonomic identifieri5660 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmaniaLeishmania braziliensis species complex
ProteomesiUP000007258 Componenti: Chromosome 26

Family & Domainsi

Phylogenomic databases

InParanoidiA4HEZ0.
KOiK10747.
OMAiLECCHGL.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4HEZ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKLFGARGR RTLQQKRVYD QLKNTTIQDA FPHIAACWVG PCWGSVMQTP
60 70 80 90 100
CNVSPVCMKM AVWRCSSCLQ EFEMVVGHFV DEGGVCPHCH NPQKRLDNVT
110 120 130 140 150
LRNAQGELVI KKPQYIKAPR MIHSNYRSVL FTNPHWESLN IQPMLAQRWE
160 170 180 190 200
LVVDELTKSS NGENGTTPDK HLLLASPKID GIRCMIGYNQ KLQEVQFFSR
210 220 230 240 250
GGIVLECCHG LVPQLLPLFK EDPTLMLDGE LFAPECNFEQ LNGLVRRLNK
260 270 280 290 300
KSSPKVMEAQ ARLLEYFAFD IMYSAQLSSP SAPFDERYQL LKKLIPVCGA
310 320 330 340 350
KRISNYIHDD AKKKVIRAKH GSVATAANGQ AVKIYHVPAA QVHPSDMKDV
360 370 380 390 400
LDEACSQGFE GVMIRLPKFP YEHGKRSFGL LKYKQMHDAE FKIVGFVPGE
410 420 430 440 450
GKFKGALGAF ICETKDGKLF NTPPKVPYKR RIELWAHRKE FLSKYLTVQY
460 470
QELSSQNVPR FPIAKAVRGS EDRQDWL
Length:477
Mass (Da):54,171
Last modified:April 30, 2007 - v1
Checksum:iE7D21870796F4C8C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR799001 Genomic DNA. Translation: CAM39399.1.
RefSeqiXP_001562368.1. XM_001562318.2.

Genome annotation databases

GeneIDi5416489.
KEGGilbz:LBRM_26_1370.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR799001 Genomic DNA. Translation: CAM39399.1.
RefSeqiXP_001562368.1. XM_001562318.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5416489.
KEGGilbz:LBRM_26_1370.

Phylogenomic databases

InParanoidiA4HEZ0.
KOiK10747.
OMAiLECCHGL.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MHOM/BR/75/M2904Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MHOM/BR/75/M2904Imported.

Entry informationi

Entry nameiA4HEZ0_LEIBR
AccessioniPrimary (citable) accession number: A4HEZ0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 30, 2007
Last sequence update: April 30, 2007
Last modified: March 31, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.