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Protein

Uncharacterized ORF3 protein

Gene

ORF3

Organism
Torque teno midi virus 1 (isolate MD1-073)
Status
Reviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized ORF3 protein
Gene namesi
ORF Names:ORF3
OrganismiTorque teno midi virus 1 (isolate MD1-073)
Taxonomic identifieri766184 [NCBI]
Taxonomic lineageiVirusesssDNA virusesAnelloviridaeGammatorquevirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000007078 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004042911 – 259Uncharacterized ORF3 proteinAdd BLAST259

Proteomic databases

PRIDEiA4GZ95

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili82 – 128Sequence analysisAdd BLAST47

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi219 – 259Ser-richAdd BLAST41

Keywords - Domaini

Coiled coil

Phylogenomic databases

OrthoDBiVOG090000PU

Family and domain databases

InterProiView protein in InterPro
IPR008474 DUF755
IPR004118 HEV_TT_virus_Orf2/Gyrovir_Vp2
PfamiView protein in Pfam
PF05501 DUF755, 1 hit
PF02957 TT_ORF2, 1 hit

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: A4GZ95-1) [UniParc]FASTAAdd to basket
Also known as: ORF3

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MQNLSAKDFY KPCRYNCETK NQMWMSGIAD SHDSWCDCDT PFAHLLASIF
60 70 80 90 100
PPGHTDRTRT IQEILTRDFR KTCLSGGADA TNSGMAETIE EKREDFQKEE
110 120 130 140 150
KEDFTEEQNI EDLLAAVADA EGRYQTNQLK TQETKTNMMC PIQSKKHYKL
160 170 180 190 200
LTQQKTLLPR CSMTGTTDGV ALHQQLLKEC NKTSQLIHLS NLIQTQNQHP
210 220 230 240 250
RKKDYYQSST THKRKRKRST NVSSLSAKKV HARSRKRRKT SSSSSSSSSS

SSRNSSTTS
Length:259
Mass (Da):29,485
Last modified:May 1, 2007 - v1
Checksum:i066F1ADE8AAA6527
GO
Isoform 2 (identifier: A4GZ95-2) [UniParc]FASTAAdd to basket
Also known as: ORF2

The sequence of this isoform differs from the canonical sequence as follows:
     124-259: Missing.

Show »
Length:123
Mass (Da):14,016
Checksum:i2F5197FBE16EAAC2
GO
Isoform 3 (identifier: A4GZ95-3) [UniParc]FASTAAdd to basket
Also known as: ORF4

The sequence of this isoform differs from the canonical sequence as follows:
     124-259: YQTNQLKTQE...SSSRNSSTTS → TSTQEKKTTT...LVNFHLNFKG

Show »
Length:261
Mass (Da):29,301
Checksum:iB95C61E03F1C568E
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_040550124 – 259Missing in isoform 2. CuratedAdd BLAST136
Alternative sequenceiVSP_040551124 – 259YQTNQ…SSTTS → TSTQEKKTTTSPPRPTKENG KDQPMSPLSLRRKYMPGAGN GGKHPQAHPAAAAAAAETQA QPLSTNQGLKSETKIITTTN GGTRITLTRFKPGFEQETEK ELAQAFNRPPRLFKEDKPFY PWLPRFTPLVNFHLNFKG in isoform 3. CuratedAdd BLAST136

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB290918 Genomic DNA Translation: BAF49424.1
AB290918 Genomic DNA Translation: BAF49425.1
AB290918 Genomic DNA Translation: BAF49426.1

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Entry informationi

Entry nameiORF3_TTVG1
AccessioniPrimary (citable) accession number: A4GZ95
Secondary accession number(s): A4GZ94, A4GZ96
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 8, 2011
Last sequence update: May 1, 2007
Last modified: March 15, 2017
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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