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A4G2D3 (A4G2D3_HERAR) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
2-dehydro-3-deoxyphosphooctonate aldolase HAMAP MF_00056
EC=2.5.1.55 HAMAP MF_00056
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase HAMAP MF_00056
KDO-8-phosphate synthase HAMAP MF_00056
Phospho-2-dehydro-3-deoxyoctonate aldolase HAMAP MF_00056
Gene names
Name:kdsA HAMAP MF_00056 EMBL CAL60670.1
Ordered Locus Names:HEAR0454
OrganismHerminiimonas arsenicoxydans [Complete proteome] [HAMAP]
Taxonomic identifier204773 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Oxalobacteraceae › Herminiimonas

Protein attributes

Sequence length280 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. HAMAP MF_00056 SAAS SAAS006269

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. HAMAP MF_00056 SAAS SAAS006269

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. HAMAP MF_00056 SAAS SAAS006269

Subcellular location

Cytoplasm By similarity HAMAP MF_00056 SAAS SAAS006269.

Sequence similarities

Belongs to the KdsA family. HAMAP MF_00056

Sequences

Sequence LengthMass (Da)Tools
A4G2D3 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: D2406070B5164608

FASTA28030,613
        10         20         30         40         50         60 
MIKIGDIKVD NALPFVLFGG INVLESRDLA MKSCEEYVRV TQKLGIPYVF KASFDKANRS 

        70         80         90        100        110        120 
SIHSYRGPGL EEGMRIFEEV KKTFNVPVIT DVHEVHQAEI VAEVADVLQL PAFLARQTDL 

       130        140        150        160        170        180 
VVALAKTGSV INIKKPQFLS PSQMMNIVEK FKEAGNEQLI LCDRGTCFGY DNLVVDMLGF 

       190        200        210        220        230        240 
GVMKKVCNNL PIIFDVTHAL QQRDPGGAAS GGRREQVADL ARAGMSVGLA GLFLEAHPDP 

       250        260        270        280 
KSAKCDGPSA LPLDKLEPFL AQLKQLDDLV KSFAPLDIEA

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU207211 Genomic DNA. Translation: CAL60670.1.
RefSeqYP_001098799.1. NC_009138.1.

3D structure databases

ProteinModelPortalA4G2D3.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4G2D3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4932182.
GenomeReviewsGene locus HEAR0454 in contig CU207211_GR.
KEGGhar:HEAR0454.
NMPDRfig|204773.3.peg.430.
PATRIC22111086. VBIHerArs17568_0434.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2877.
HOGENOMHBG575990.
OMAQLILCDR.
PhylomeDBA4G2D3.
ProtClustDBPRK05198.

Family and domain databases

HAMAPMF_00056. KDO8P_synth.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01627.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4G2D3_HERAR
AccessionPrimary (citable) accession number: A4G2D3
Entry history
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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