A4FZU0 (A4FZU0_METM5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Probable brix domain-containing ribosomal biogenesis protein HAMAP-Rule MF_00699

Gene names

Ordered Locus Names:

MmarC5_1426 EMBL ABO35724.1

Organism

Methanococcus maripaludis (strain C5 / ATCC BAA-1333) [Complete proteome] [HAMAP] EMBL ABO35724.1

Taxonomic identifier

402880 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus › Methanococcus maripaludis

Protein attributes

Sequence length	164 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Probably involved in the biogenesis of the ribosome By similarity. HAMAP-Rule MF_00699
Sequence similarities	Contains 1 Brix domain. HAMAP-Rule MF_00699

Ontologies

Keywords
Biological process	Ribosome biogenesis HAMAP-Rule MF_00699
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ribosome biogenesis Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Domain	1 – 164	164	Brix By similarity HAMAP-Rule MF_00699

Sequences

	Sequence		Length	Mass (Da)
	A4FZU0 [UniParc]. Last modified April 17, 2007. Version 1. Checksum: 7C5CDF6E7646C58D	FASTA	164	19,026
	10 20 30 40 50 60 MIITTSRKPS QRTRSLVNDL ARVFNFEILN RGKIPLSELI ENKDDMIIVE ELKGNPGRLK 70 80 90 100 110 120 IFNFENNKIL SMNLSLKLQR EVSGKVFKNS GKLSSKFDKN TENLKELFFE YLFKKLSNYE 130 140 150 160 EESSDVVLNF KTVDESTFYI EVHKDSENLG PSLKIKTVKI LDIE

References

[1]

"Complete sequence of chromosome of Methanococcus maripaludis C5." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Detter J.C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C5 / ATCC BAA-1333.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000609 Genomic DNA. Translation: ABO35724.1.
RefSeq	YP_001097938.1. NC_009135.1.
3D structure databases
ProteinModelPortal	A4FZU0.
ModBase	Search...
Protein-protein interaction databases
STRING	402880.MmarC5_1426.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABO35724; ABO35724; MmarC5_1426.
GeneID	4928592.
KEGG	mmq:MmarC5_1426.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2136.
HOGENOM	HOG000254365.
KO	K14561.
OMA	NKILSMN.
ProtClustDB	PRK00933.
Enzyme and pathway databases
BioCyc	MMAR402880:GJ2R-1446-MONOMER.
Family and domain databases
HAMAP	MF_00699. BriX.
InterPro	IPR004154. Anticodon-bd. IPR007109. Brix. IPR023548. Brix_archaea. [Graphical view]
Pfam	PF04427. Brix. 1 hit. [Graphical view]
SMART	SM00879. Brix. 1 hit. [Graphical view]
SUPFAM	SSF52954. Anticodon_bd. 1 hit.
PROSITE	PS50833. BRIX. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4FZU0_METM5

Accession

Primary (citable) accession number: A4FZU0

Entry history

Integrated into UniProtKB/TrEMBL:	April 17, 2007
Last sequence update:	April 17, 2007
Last modified:	May 1, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)