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Protein

50S ribosomal protein L1

Gene

rpl1

Organism
Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Binds directly to 23S rRNA. Probably involved in E site tRNA release.UniRule annotation
Protein L1 is also a translational repressor protein, it controls the translation of its operon by binding to its mRNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRepressor, Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding
Biological processTranslation regulation

Enzyme and pathway databases

BioCyciMMAR402880:G1G8G-1441-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L1UniRule annotation
Gene namesi
Name:rpl1UniRule annotation
Ordered Locus Names:MmarC5_1413
OrganismiMethanococcus maripaludis (strain C5 / ATCC BAA-1333)
Taxonomic identifieri402880 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
Proteomesi
  • UP000000253 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000519101 – 21350S ribosomal protein L1Add BLAST213

Proteomic databases

PRIDEiA4FZS7

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi402880.MmarC5_1413

Structurei

3D structure databases

ProteinModelPortaliA4FZS7
SMRiA4FZS7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL1 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04289 Archaea
COG0081 LUCA
HOGENOMiHOG000207016
KOiK02863
OMAiGWTDVDV
OrthoDBiPOG093Z0ALA

Family and domain databases

CDDicd00403 Ribosomal_L1, 1 hit
Gene3Di3.40.50.790, 1 hit
HAMAPiMF_01318_A Ribosomal_L1_A, 1 hit
InterProiView protein in InterPro
IPR002143 Ribosomal_L1
IPR023674 Ribosomal_L1-like
IPR028364 Ribosomal_L1/biogenesis
IPR016095 Ribosomal_L1_3-a/b-sand
IPR023669 Ribosomal_L1_arc
IPR023673 Ribosomal_L1_CS
PfamiView protein in Pfam
PF00687 Ribosomal_L1, 1 hit
PIRSFiPIRSF002155 Ribosomal_L1, 1 hit
SUPFAMiSSF56808 SSF56808, 1 hit
PROSITEiView protein in PROSITE
PS01199 RIBOSOMAL_L1, 1 hit

Sequencei

Sequence statusi: Complete.

A4FZS7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDSEKILNAV KEARTLAKPR NFTQSVDLIV NLKELDLSRP ENRLKEQIVL
60 70 80 90 100
PSGRGKDVAI AVIAKGDLAA QAEEMGLTVI RQEELEELGK NKKTAKKIAN
110 120 130 140 150
AHGFFIAQAD MMPLVGKSLG PVLGPRGKMP QPVPGNANLA PLVARFQKTV
160 170 180 190 200
SINTRDKALF QVYIGHESMS DDELAANAEA ILNVVSRKYE KGLYHVKSAF
210
TKLTMGAAAP IEK
Length:213
Mass (Da):23,184
Last modified:April 17, 2007 - v1
Checksum:i38BA9A5D3877D2C5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000609 Genomic DNA Translation: ABO35711.1
RefSeqiWP_011869162.1, NC_009135.1

Genome annotation databases

EnsemblBacteriaiABO35711; ABO35711; MmarC5_1413
GeneIDi4928419
KEGGimmq:MmarC5_1413

Similar proteinsi

Entry informationi

Entry nameiRL1_METM5
AccessioniPrimary (citable) accession number: A4FZS7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: April 17, 2007
Last modified: May 23, 2018
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

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