A4FZC6 (A4FZC6_METM5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ABO35560.1

Gene names

Ordered Locus Names:

MmarC5_1262 EMBL ABO35560.1

Organism

Methanococcus maripaludis (strain C5 / ATCC BAA-1333) [Complete proteome] [HAMAP] EMBL ABO35560.1

Taxonomic identifier

402880 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus › Methanococcus maripaludis

Protein attributes

Sequence length	394 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABO35560.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4FZC6 [UniParc]. Last modified April 17, 2007. Version 1. Checksum: 7AF2543AB2BF16F0	FASTA	394	46,556
	10 20 30 40 50 60 MDKMYLSEDI PNFEEFIINA SKRLNIDEDT LENGFKRKLI TKYEYNGKKY LCFKKKLKHI 70 80 90 100 110 120 ERGTILFLND NLDFIQGYPK IRRAMVLESA VEKYFDNKIA VEEKLDGYNI RIVKFYGEII 130 140 150 160 170 180 AITRGGKICP FTTKKVKKYM NTKFLDDFPE LMLCGEMVGL NNPYVSHYYP EADKNHENLG 190 200 210 220 230 240 FYIFDIRNKE TNSAISISEK EKLLDKYDIP YVKPIKIIDS SDFEELWNLL DDLNEKHREG 250 260 270 280 290 300 VVLKDLKMIK NPIKYTTHNT QCGDLSVAFK YVYDLGIDFM FSRLVREGYQ SFEKCENEEE 310 320 330 340 350 360 IKKRSHDLGE SILTPMVETI KEISKDGLAK ECFELYFDSE DDFNEFINYL KTMHINFAIE 370 380 390 TREYIKKDVF KAKICRIYNS TSNKIKSHLE GNLW

References

[1]

"Complete sequence of chromosome of Methanococcus maripaludis C5." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Detter J.C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C5 / ATCC BAA-1333.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000609 Genomic DNA. Translation: ABO35560.1.
RefSeq	YP_001097774.1. NC_009135.1.
3D structure databases
ProteinModelPortal	A4FZC6.
ModBase	Search...
Protein-protein interaction databases
STRING	402880.MmarC5_1262.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABO35560; ABO35560; MmarC5_1262.
GeneID	4929261.
KEGG	mmq:MmarC5_1262.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1423.
HOGENOM	HOG000224394.
KO	K07468.
OMA	EEKMNGY.
ProtClustDB	CLSK862643.
Enzyme and pathway databases
BioCyc	MMAR402880:GJ2R-1279-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR001072. Uncharacterised_MJ0414. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PRINTS	PR01048. Y414FAMILY.
TIGRFAMs	TIGR01209. TIGR01209. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4FZC6_METM5

Accession

Primary (citable) accession number: A4FZC6

Entry history

Integrated into UniProtKB/TrEMBL:	April 17, 2007
Last sequence update:	April 17, 2007
Last modified:	May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)