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Protein
Submitted name:

ATP dependent DNA ligase

Gene

MmarC5_1262

Organism
Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMMAR402880:GJ2R-1279-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:MmarC5_1262Imported
OrganismiMethanococcus maripaludis (strain C5 / ATCC BAA-1333)Imported
Taxonomic identifieri402880 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
ProteomesiUP000000253: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi402880.MmarC5_1262.

Structurei

3D structure databases

ProteinModelPortaliA4FZC6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

A4FZC6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKMYLSEDI PNFEEFIINA SKRLNIDEDT LENGFKRKLI TKYEYNGKKY
60 70 80 90 100
LCFKKKLKHI ERGTILFLND NLDFIQGYPK IRRAMVLESA VEKYFDNKIA
110 120 130 140 150
VEEKLDGYNI RIVKFYGEII AITRGGKICP FTTKKVKKYM NTKFLDDFPE
160 170 180 190 200
LMLCGEMVGL NNPYVSHYYP EADKNHENLG FYIFDIRNKE TNSAISISEK
210 220 230 240 250
EKLLDKYDIP YVKPIKIIDS SDFEELWNLL DDLNEKHREG VVLKDLKMIK
260 270 280 290 300
NPIKYTTHNT QCGDLSVAFK YVYDLGIDFM FSRLVREGYQ SFEKCENEEE
310 320 330 340 350
IKKRSHDLGE SILTPMVETI KEISKDGLAK ECFELYFDSE DDFNEFINYL
360 370 380 390
KTMHINFAIE TREYIKKDVF KAKICRIYNS TSNKIKSHLE GNLW
Length:394
Mass (Da):46,556
Last modified:April 17, 2007 - v1
Checksum:i7AF2543AB2BF16F0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000609 Genomic DNA. Translation: ABO35560.1.
RefSeqiYP_001097774.1. NC_009135.1.

Genome annotation databases

EnsemblBacteriaiABO35560; ABO35560; MmarC5_1262.
GeneIDi4929261.
KEGGimmq:MmarC5_1262.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000609 Genomic DNA. Translation: ABO35560.1.
RefSeqiYP_001097774.1. NC_009135.1.

3D structure databases

ProteinModelPortaliA4FZC6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi402880.MmarC5_1262.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO35560; ABO35560; MmarC5_1262.
GeneIDi4929261.
KEGGimmq:MmarC5_1262.

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Enzyme and pathway databases

BioCyciMMAR402880:GJ2R-1279-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C5 / ATCC BAA-1333Imported.

Entry informationi

Entry nameiA4FZC6_METM5
AccessioniPrimary (citable) accession number: A4FZC6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: January 7, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.