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Protein
Submitted name:

ATP dependent DNA ligase

Gene

MmarC5_1262

Organism
Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciMMAR402880:G1G8G-1283-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:MmarC5_1262Imported
OrganismiMethanococcus maripaludis (strain C5 / ATCC BAA-1333)Imported
Taxonomic identifieri402880 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
Proteomesi
  • UP000000253 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi402880.MmarC5_1262

Structurei

3D structure databases

ProteinModelPortaliA4FZC6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini98 – 255RNA_ligaseInterPro annotationAdd BLAST158

Phylogenomic databases

eggNOGiarCOG04218 Archaea
COG1423 LUCA
HOGENOMiHOG000224394
KOiK07468
OMAiEEKMNGY
OrthoDBiPOG093Z048P

Family and domain databases

CDDicd07894 Adenylation_RNA_ligase, 1 hit
InterProiView protein in InterPro
IPR021122 RNA_ligase_dom_REL/Rnl2
IPR001072 RNA_ligase_Pab1020
PfamiView protein in Pfam
PF09414 RNA_ligase, 1 hit
PRINTSiPR01048 Y414FAMILY
TIGRFAMsiTIGR01209 TIGR01209, 1 hit

Sequencei

Sequence statusi: Complete.

A4FZC6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKMYLSEDI PNFEEFIINA SKRLNIDEDT LENGFKRKLI TKYEYNGKKY
60 70 80 90 100
LCFKKKLKHI ERGTILFLND NLDFIQGYPK IRRAMVLESA VEKYFDNKIA
110 120 130 140 150
VEEKLDGYNI RIVKFYGEII AITRGGKICP FTTKKVKKYM NTKFLDDFPE
160 170 180 190 200
LMLCGEMVGL NNPYVSHYYP EADKNHENLG FYIFDIRNKE TNSAISISEK
210 220 230 240 250
EKLLDKYDIP YVKPIKIIDS SDFEELWNLL DDLNEKHREG VVLKDLKMIK
260 270 280 290 300
NPIKYTTHNT QCGDLSVAFK YVYDLGIDFM FSRLVREGYQ SFEKCENEEE
310 320 330 340 350
IKKRSHDLGE SILTPMVETI KEISKDGLAK ECFELYFDSE DDFNEFINYL
360 370 380 390
KTMHINFAIE TREYIKKDVF KAKICRIYNS TSNKIKSHLE GNLW
Length:394
Mass (Da):46,556
Last modified:April 17, 2007 - v1
Checksum:i7AF2543AB2BF16F0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000609 Genomic DNA Translation: ABO35560.1
RefSeqiWP_011869012.1, NC_009135.1

Genome annotation databases

EnsemblBacteriaiABO35560; ABO35560; MmarC5_1262
GeneIDi4929261
KEGGimmq:MmarC5_1262

Similar proteinsi

Entry informationi

Entry nameiA4FZC6_METM5
AccessioniPrimary (citable) accession number: A4FZC6
Entry historyiIntegrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: March 28, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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