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A4FZ71

- RNP3_METM5

UniProt

A4FZ71 - RNP3_METM5

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Protein

Ribonuclease P protein component 3

Gene

rnp3

Organism
Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.UniRule annotation

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.UniRule annotation

GO - Molecular functioni

  1. ribonuclease P activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. tRNA 5'-leader removal Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

tRNA processing

Enzyme and pathway databases

BioCyciMMAR402880:GJ2R-1222-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P protein component 3UniRule annotation (EC:3.1.26.5UniRule annotation)
Short name:
RNase P component 3UniRule annotation
Alternative name(s):
Rpp30UniRule annotation
Gene namesi
Name:rnp3UniRule annotation
Ordered Locus Names:MmarC5_1207
OrganismiMethanococcus maripaludis (strain C5 / ATCC BAA-1333)
Taxonomic identifieri402880 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
ProteomesiUP000000253: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
  2. ribonuclease P complex Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 231231Ribonuclease P protein component 3PRO_1000046627Add
BLAST

Interactioni

Subunit structurei

Consists of a catalytic RNA component and at least 4-5 protein subunits.UniRule annotation

Protein-protein interaction databases

STRINGi402880.MmarC5_1207.

Structurei

3D structure databases

ProteinModelPortaliA4FZ71.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic/archaeal RNase P protein component 3 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1603.
HOGENOMiHOG000296348.
KOiK03539.
OMAiVAIELNF.

Family and domain databases

HAMAPiMF_00756. RNase_P_3.
InterProiIPR016195. Pol/histidinol_Pase-like.
IPR023539. RNase_P_comp-3_arc.
IPR002738. RNase_P_p30.
[Graphical view]
PfamiPF01876. RNase_P_p30. 1 hit.
[Graphical view]
SUPFAMiSSF89550. SSF89550. 1 hit.

Sequencei

Sequence statusi: Complete.

A4FZ71-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLEGIFDINH IFDENGIKTL KRFGWDGSVA VQNHNEYSEE KINNAVEYGE
60 70 80 90 100
NCEFKVFSGL KLSTKNQNEM EKAVKKYRNK VDILLVEGGE IKINRRVLEM
110 120 130 140 150
NDVDILSTPE LNRMDNGLDH ILARLGSTNR VAIELNFGNL LKSRNYDRSK
160 170 180 190 200
ILWAFQRNLK LAKKYDTPVV ISSGANDIYG IKAPGDLRGF LNTITDPLYS
210 220 230
KKIIETPSKI VDYRLYLKKD NVLTLGIEVV E
Length:231
Mass (Da):26,386
Last modified:April 17, 2007 - v1
Checksum:iF5DE815315D10055
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000609 Genomic DNA. Translation: ABO35505.1.
RefSeqiWP_011868958.1. NC_009135.1.
YP_001097719.1. NC_009135.1.

Genome annotation databases

EnsemblBacteriaiABO35505; ABO35505; MmarC5_1207.
GeneIDi4928940.
KEGGimmq:MmarC5_1207.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000609 Genomic DNA. Translation: ABO35505.1 .
RefSeqi WP_011868958.1. NC_009135.1.
YP_001097719.1. NC_009135.1.

3D structure databases

ProteinModelPortali A4FZ71.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 402880.MmarC5_1207.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABO35505 ; ABO35505 ; MmarC5_1207 .
GeneIDi 4928940.
KEGGi mmq:MmarC5_1207.

Phylogenomic databases

eggNOGi COG1603.
HOGENOMi HOG000296348.
KOi K03539.
OMAi VAIELNF.

Enzyme and pathway databases

BioCyci MMAR402880:GJ2R-1222-MONOMER.

Family and domain databases

HAMAPi MF_00756. RNase_P_3.
InterProi IPR016195. Pol/histidinol_Pase-like.
IPR023539. RNase_P_comp-3_arc.
IPR002738. RNase_P_p30.
[Graphical view ]
Pfami PF01876. RNase_P_p30. 1 hit.
[Graphical view ]
SUPFAMi SSF89550. SSF89550. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C5 / ATCC BAA-1333.

Entry informationi

Entry nameiRNP3_METM5
AccessioniPrimary (citable) accession number: A4FZ71
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: April 17, 2007
Last modified: October 29, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3