A4FYH8 (A4FYH8_METM5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA-3'-phosphate cyclase EMBL ABO35262.1
EC=6.5.1.4 EMBL ABO35262.1

Gene names

Ordered Locus Names:

MmarC5_0956

Organism

Methanococcus maripaludis (strain C5 / ATCC BAA-1333) [Complete proteome] [HAMAP]

Taxonomic identifier

402880 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus

Protein attributes

Sequence length	337 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABO35262.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro
Molecular function	RNA-3'-phosphate cyclase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4FYH8 [UniParc]. Last modified April 17, 2007. Version 1. Checksum: 1B9213C01092689D	FASTA	337	37,051
	10 20 30 40 50 60 MITIDGSYLE GGGQIVRTAI SLSAITKKPV KIINIRKNRK NPGLSNQHIA CVEAVSKICN 70 80 90 100 110 120 ANVEGLLKGS ETLIFYPEDI TAKNFEIDIK TAGSISLVIQ SILPMCLAIN KNIEITLIGG 130 140 150 160 170 180 TNVEFSPPID YIKKITLKFL ENIGINSEIN IIERGFFPEG GGIVKISLKP SKIVPLELIE 190 200 210 220 230 240 NKNIEIKGVV FNQDLDENIS KRIRKSASDI LLNKGFCPEI KLENREGKST GVGIFLFNKY 250 260 270 280 290 300 IGSDCLGKKG LLSETVGKIA SEDLLEELGT KMAIDSHLAD QIIPFMPFSD IKIGVSKITN 310 320 330 HTLTNIYVVE KFFDVKFNIE EYSKDNAKGY VISTKGV

References

[1]

"Complete sequence of chromosome of Methanococcus maripaludis C5." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Detter J.C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C5 / ATCC BAA-1333.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000609 Genomic DNA. Translation: ABO35262.1.
RefSeq	YP_001097477.1. NC_009135.1.
3D structure databases
ProteinModelPortal	A4FYH8.
ModBase	Search...
Protein-protein interaction databases
STRING	A4FYH8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4928445.
GenomeReviews	Gene locus MmarC5_0956 in contig CP000609_GR.
KEGG	mmq:MmarC5_0956.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG04553.
HOGENOM	HBG683539.
OMA	HYLALVW.
PhylomeDB	A4FYH8.
ProtClustDB	PRK04204.
Family and domain databases
InterPro	IPR013791. RNA3'-term_phos_cycl_insert. IPR023797. RNA3'_phos_cyclase_dom. IPR000228. RNA3'_term_phos_cyc. IPR017770. RNA3'_term_phos_cyc_type_1. IPR020719. RNA3'_term_phos_cycl-like_CS. IPR013796. RNA3'_term_phos_cycl_insert. IPR013792. RNA3'P_cycl/enolpyr_Trfase_a/b. [Graphical view]
Gene3D	G3DSA:3.65.10.20. RNA3'_term_phos_cycl. 2 hits.
KO	K01974.
PANTHER	PTHR11096. RNA3'_term_phos_cycl. 1 hit.
Pfam	PF01137. RTC. 1 hit. PF05189. RTC_insert. 1 hit. [Graphical view]
SUPFAM	SSF52913. RNA3'-term_phos_cycl_insert. 1 hit. SSF55205. RNA3'_cycl/enolpyr_transf_A/B. 1 hit.
TIGRFAMs	TIGR03399. RNA_3prim_cycl. 1 hit.
PROSITE	PS01287. RTC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4FYH8_METM5

Accession

Primary (citable) accession number: A4FYH8

Entry history

Integrated into UniProtKB/TrEMBL:	April 17, 2007
Last sequence update:	April 17, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)