A4FWD7 (A4FWD7_METM5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Nickel-dependent hydrogenase, large subunit EMBL ABO34512.1

Gene names

Ordered Locus Names:

MmarC5_0196

Organism

Methanococcus maripaludis (strain C5 / ATCC BAA-1333) [Complete proteome] [HAMAP]

Taxonomic identifier

402880 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus

Protein attributes

Sequence length	390 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. RuleBase RU003896

Ontologies

Keywords
Ligand	Metal-binding RuleBase RU003896 Nickel RuleBase RU003896
Molecular function	Oxidoreductase RuleBase RU003896
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	coenzyme F420 hydrogenase activity Inferred from electronic annotation. Source: InterPro ferredoxin hydrogenase activity Inferred from electronic annotation. Source: InterPro flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro nickel cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4FWD7 [UniParc]. Last modified April 17, 2007. Version 1. Checksum: 603655CD7F5001FD	FASTA	390	43,386
	10 20 30 40 50 60 MAEPVTISPT TRHEGHAKLV LNVDDEGIVT KAFYPNTTPV RGFETMLQGK PAAFGPIAVM 70 80 90 100 110 120 RICGICQATH GIASCEAIEH AIDMEIPKDG MILRELVGLG NRMHSHPLHH LLIVDDLLKP 130 140 150 160 170 180 EEAGTLRVEG IKLIQRMRKA GQMLVDVAGG EGIHPPNLMV GGMRTNITER AKAKLYYACR 190 200 210 220 230 240 EYEKDCNAML EVLEMLMERY LEEIGIPDLG KHDLPYIASD TTFGNRDAIN FKDITEVTAQ 250 260 270 280 290 300 RYYADFPDIA QTATNQIPFY RGNPAEGGPR ARMIKYGNFK SAGGAMDINL ARAMENFEAV 310 320 330 340 350 360 KRSLELIDEL NINGTTREIP NFSNAKEEYG IGVHEAPRAI NTHMAKMGKD GKIEKYNIIA 370 380 390 ASTWNFPAVE KAIEGYHHQY AEVIMRAYDI

References

[1]

"Complete sequence of chromosome of Methanococcus maripaludis C5." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Detter J.C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C5 / ATCC BAA-1333.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000609 Genomic DNA. Translation: ABO34512.1.
RefSeq	YP_001096727.1. NC_009135.1.
3D structure databases
ProteinModelPortal	A4FWD7.
ModBase	Search...
Protein-protein interaction databases
STRING	A4FWD7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4928050.
GenomeReviews	Gene locus MmarC5_0196 in contig CP000609_GR.
KEGG	mmq:MmarC5_0196.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG04841.
HOGENOM	HBG287963.
OMA	NINGATK.
ProtClustDB	CLSK2393124.
Family and domain databases
InterPro	IPR017682. Coenz_F420_hydrogenase_asu. IPR001501. Ni-dep_hyd_lsu. IPR018194. Ni-dep_hyd_lsu_Ni_BS. [Graphical view]
KO	K00440.
Pfam	PF00374. NiFeSe_Hases. 2 hits. [Graphical view]
TIGRFAMs	TIGR03295. FrhA. 1 hit.
PROSITE	PS00507. NI_HGENASE_L_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4FWD7_METM5

Accession

Primary (citable) accession number: A4FWD7

Entry history

Integrated into UniProtKB/TrEMBL:	April 17, 2007
Last sequence update:	April 17, 2007
Last modified:	November 16, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)