A4FWB3 (A4FWB3_METM5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribonuclease P protein component 1 HAMAP MF_00754
Short name=RNase P component 1 HAMAP MF_00754
EC=3.1.26.5 HAMAP MF_00754

Gene names

Name:	rnp1 HAMAP MF_00754
Ordered Locus Names:	MmarC5_0171

Organism

Methanococcus maripaludis (strain C5 / ATCC BAA-1333) [Complete proteome] [HAMAP]

Taxonomic identifier

402880 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus

Protein attributes

Sequence length	99 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends By similarity. HAMAP MF_00754
Catalytic activity	Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor. HAMAP MF_00754
Subunit structure	Consists of a catalytic RNA component and at least 4 protein subunits By similarity. HAMAP MF_00754
Sequence similarities	Belongs to the eukaryotic/archaeal RNase P protein component 1 family. HAMAP MF_00754

Ontologies

Keywords
Biological process	tRNA processing HAMAP MF_00754
Molecular function	Hydrolase HAMAP MF_00754 EMBL ABO34488.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	mRNA cleavage Inferred from electronic annotation. Source: InterPro rRNA processing Inferred from electronic annotation. Source: InterPro tRNA 5'-leader removal Inferred from electronic annotation. Source: HAMAP
Cellular component	ribonuclease MRP complex Inferred from electronic annotation. Source: InterPro ribonuclease P complex Inferred from electronic annotation. Source: InterPro
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease P activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4FWB3 [UniParc]. Last modified April 17, 2007. Version 1. Checksum: E142256975294CFD	FASTA	99	11,312
	10 20 30 40 50 60 MKLSQNILRH ELIGLDLEVV KSTDSGLIST KGRVINETRN TLVLEKENGK EITVVKEIST 70 80 90 FRIDFKNSGD VVKVDIDGRL LVGRPEDRLK RKIKQLYSY

References

[1]

"Complete sequence of chromosome of Methanococcus maripaludis C5." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Detter J.C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C5 / ATCC BAA-1333.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000609 Genomic DNA. Translation: ABO34488.1.
RefSeq	YP_001096703.1. NC_009135.1.
3D structure databases
ProteinModelPortal	A4FWB3.
ModBase	Search...
Protein-protein interaction databases
STRING	A4FWB3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4928763.
GenomeReviews	Gene locus MmarC5_0171 in contig CP000609_GR.
KEGG	mmq:MmarC5_0171.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG12604.
HOGENOM	HBG704950.
OMA	ISTKGRV.
ProtClustDB	PRK03879.
Family and domain databases
HAMAP	MF_00754. RNase_P_1. [Tree]
InterPro	IPR002730. RNase_P/MRP_p29. IPR023538. RNase_P_comp-1. IPR023534. Rof/RNase_P-like. [Graphical view]
Gene3D	G3DSA:2.30.30.210. RNase_P_Rpp29. 1 hit.
KO	K03538.
Pfam	PF01868. UPF0086. 1 hit. [Graphical view]
SMART	SM00538. POP4. 1 hit. [Graphical view]
SUPFAM	SSF101744. RNase_P_Rpp29. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4FWB3_METM5

Accession

Primary (citable) accession number: A4FWB3

Entry history

Integrated into UniProtKB/TrEMBL:	April 17, 2007
Last sequence update:	April 17, 2007
Last modified:	November 16, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)