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Protein
Submitted name:

Glycerol uptake facilitator protein

Gene

glpF

Organism
Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycerol uptake facilitator proteinImported
Gene namesi
Name:glpFImported
Ordered Locus Names:SACE_6517Imported
OrganismiSaccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338)Imported
Taxonomic identifieri405948 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPseudonocardialesPseudonocardiaceaeSaccharopolyspora
Proteomesi
  • UP000006728 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 3025HelicalSequence analysisAdd
BLAST
Transmembranei42 – 6524HelicalSequence analysisAdd
BLAST
Transmembranei85 – 10622HelicalSequence analysisAdd
BLAST
Transmembranei132 – 15120HelicalSequence analysisAdd
BLAST
Transmembranei171 – 19525HelicalSequence analysisAdd
BLAST
Transmembranei222 – 24423HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi405948.SeryN2_010100012302.

Structurei

3D structure databases

ProteinModelPortaliA4FNR1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105D8C. Bacteria.
COG0580. LUCA.
HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.
OrthoDBiPOG091H00B1.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4FNR1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPGEIFLWE FMGTAMLTLL GCGVVANNVL RRSLGHNGGW LLVNFGWGFA
60 70 80 90 100
VFAGASIAAP SGAHINPAVT LGLAVNGQVS WSQVPFYIVA QVLGGILGAL
110 120 130 140 150
LCWAAYKLQF DTHDAPGETL GIFSTGPTVP SAPWNLVTEI IGTFVLVFWI
160 170 180 190 200
IQNPSAEVGQ AGVPEFGNAA LGYAAVTFIV IGIGNSLGGP TGYAINPARD
210 220 230 240
LGPRIAYALL PIRGKGSANW GYSWVPVAGP IAGGVLAGLL ALALPAS
Length:247
Mass (Da):25,370
Last modified:April 17, 2007 - v1
Checksum:i7F337C500FCB6E2A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM420293 Genomic DNA. Translation: CAM05686.1.
RefSeqiWP_011875065.1. NZ_ABFV01000018.1.

Genome annotation databases

EnsemblBacteriaiCAM05686; CAM05686; SACE_6517.
KEGGisen:SACE_6517.
PATRICi23420452. VBISacEry28377_6509.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM420293 Genomic DNA. Translation: CAM05686.1.
RefSeqiWP_011875065.1. NZ_ABFV01000018.1.

3D structure databases

ProteinModelPortaliA4FNR1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi405948.SeryN2_010100012302.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAM05686; CAM05686; SACE_6517.
KEGGisen:SACE_6517.
PATRICi23420452. VBISacEry28377_6509.

Phylogenomic databases

eggNOGiENOG4105D8C. Bacteria.
COG0580. LUCA.
HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.
OrthoDBiPOG091H00B1.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA4FNR1_SACEN
AccessioniPrimary (citable) accession number: A4FNR1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: September 7, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.