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A4FLE3 (A4FLE3_SACEN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SACE_5682 EMBL CAM04868.1
OrganismSaccharopolyspora erythraea (strain NRRL 23338) [Complete proteome] [HAMAP] EMBL CAM04868.1
Taxonomic identifier405948 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeSaccharopolyspora

Protein attributes

Sequence length333 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CAM04868.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4FLE3 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: 0B2A4BE3208E5305

FASTA33337,925
        10         20         30         40         50         60 
MTDPQALLDD DERSLLRRWT GDWAEPQLAT LTDAPFSDPA WIYERKLDGM RVIAGSEGGG 

        70         80         90        100        110        120 
EPVLWSRSHR RVNTAYPEVA DALAEQAADR FVVDGEVVAF EGDQTSFARL QRRIHLGDAR 

       130        140        150        160        170        180 
AARNTGVRVF YYVFDVLAFG GVDLRRLPLR TRKRLLRESF DFADPLRFSA HRSGNGEEFL 

       190        200        210        220        230        240 
AQACERGWEG LIAKRADRPY CSGRSRDWLK FKCVSDQEFV IGGYTEPKGS RVGFGALLLG 

       250        260        270        280        290        300 
YYEGDRFRYA GKVGTGYDER TLRDLRARLD RIERDASPFH DRVAERDAHW VEPELVAQIG 

       310        320        330 
FTEWTSDGRL RHPRFSGLRN DKPAHEVVRE APA 

« Hide

References

[1]"Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL23338."
Oliynyk M., Samborskyy M., Lester J.B., Mironenko T., Scott N., Dickens S., Haydock S.F., Leadlay P.F.
Nat. Biotechnol. 25:447-453(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NRRL 23338.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM420293 Genomic DNA. Translation: CAM04868.1.
RefSeqYP_001107793.1. NC_009142.1.

3D structure databases

ProteinModelPortalA4FLE3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING405948.SACE_5682.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAM04868; CAM04868; SACE_5682.
GeneID4945424.
KEGGsen:SACE_5682.
PATRIC23418700. VBISacEry28377_5640.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222509.
KOK01971.
OMACIESEAF.
OrthoDBEOG661H49.
ProtClustDBCLSK820690.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4FLE3_SACEN
AccessionPrimary (citable) accession number: A4FLE3
Entry history
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: April 16, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)