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A4FKF9 (A4FKF9_SACEN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
ATP synthase subunit a HAMAP-Rule MF_01393
Alternative name(s):
ATP synthase F0 sector subunit a HAMAP-Rule MF_01393
F-ATPase subunit 6 HAMAP-Rule MF_01393
Gene names
Name:atpB HAMAP-Rule MF_01393 EMBL CAM04534.1
Ordered Locus Names:SACE_5295 EMBL CAM04534.1
OrganismSaccharopolyspora erythraea (strain NRRL 23338) [Complete proteome] [HAMAP] EMBL CAM04534.1
Taxonomic identifier405948 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Saccharopolyspora ›

Protein attributes

Sequence length260 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane By similarity. RuleBase RU000483 HAMAP-Rule MF_01393

Subunit structure

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has four main subunits: a, b, b' and c By similarity. HAMAP-Rule MF_01393

Subcellular location

Cell membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01393.

Membrane; Multi-pass membrane protein By similarity RuleBase RU000483.

Sequence similarities

Belongs to the ATPase A chain family. RuleBase RU000483 HAMAP-Rule MF_01393

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Transmembrane29 – 4921Helical; By similarity HAMAP-Rule MF_01393
Transmembrane92 – 11221Helical; By similarity HAMAP-Rule MF_01393
Transmembrane120 – 14021Helical; By similarity HAMAP-Rule MF_01393
Transmembrane164 – 18421Helical; By similarity HAMAP-Rule MF_01393
Transmembrane189 – 20921Helical; By similarity HAMAP-Rule MF_01393
Transmembrane218 – 23821Helical; By similarity HAMAP-Rule MF_01393

Sequences

Sequence LengthMass (Da)Tools
A4FKF9 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: 81253964E832E1B4

FASTA26028,386
        10         20         30         40         50         60 
MGTRMSAAGG EFQPPGAESL DLPPILLGVT KPMLLCVLSV AVVAAFFLVS TKRLKLVPGR 

        70         80         90        100        110        120 
FQFAVESVYD LARNGIAREQ IGAKDFRRFV PLVLALFTFV LVNNIFGIIP LIQFPTMARI 

       130        140        150        160        170        180 
GFPAALAVLV VYPVYHYVGF RRHGFTGYLK KALFPPGVPK PVYVLVTPIE FVLKFFFDPV 

       190        200        210        220        230        240 
SLALRVFGAM LAGHLMLLVF TLGGEYLLLE AGAMLKPVSV LAFAMAIAMT LLEAFIQVLQ 

       250        260 
AYIFALLSAS YIGRALAEDH

« Hide

References

[1]"Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL23338."
Oliynyk M., Samborskyy M., Lester J.B., Mironenko T., Scott N., Dickens S., Haydock S.F., Leadlay P.F.
Nat. Biotechnol. 25:447-453(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NRRL 23338.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM420293 Genomic DNA. Translation: CAM04534.1.
RefSeqYP_001107459.1. NC_009142.1.

3D structure databases

ProteinModelPortalA4FKF9.
ModBaseSearch...

Protein-protein interaction databases

STRING405948.SACE_5295.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAM04534; CAM04534; SACE_5295.
GeneID4945089.
KEGGsen:SACE_5295.
PATRIC23417990. VBISacEry28377_5285.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0356.
HOGENOMHOG000253873.
KOK02108.
OMAHIKDSHE.
ProtClustDBCLSK731182.

Family and domain databases

Gene3D1.20.120.220. 1 hit.
HAMAPMF_01393. ATP_synth_a_bact.
InterProIPR000568. ATPase_F0-cplx_asu.
[Graphical view]
PANTHERPTHR11410. PTHR11410. 1 hit.
PfamPF00119. ATP-synt_A. 1 hit.
[Graphical view]
PRINTSPR00123. ATPASEA.
SUPFAMSSF81336. ATPase_F0_A. 1 hit.
TIGRFAMsTIGR01131. ATP_synt_6_or_A. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4FKF9_SACEN
AccessionPrimary (citable) accession number: A4FKF9
Entry history
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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