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Protein
Submitted name:

DNA ligase (ATP)

Gene

SACE_3549

Organism
Saccharopolyspora erythraea (strain NRRL 23338)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:SACE_3549Imported
OrganismiSaccharopolyspora erythraea (strain NRRL 23338)Imported
Taxonomic identifieri405948 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPseudonocardialesPseudonocardiaceaeSaccharopolyspora
ProteomesiUP000006728 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi405948.SeryN2_010100000155.

Structurei

3D structure databases

ProteinModelPortaliA4FFJ8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
KOiK01971.
OMAiKIFIDWS.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

A4FFJ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGSDVTVEV SGRRLKLSNL DKVLYPVTGF TKRDVVDYYQ RVAPAMLPHL
60 70 80 90 100
RDRAATLIRF PDGVGGFSFY EKNVGRHAPD WLPTVALISG AEGTGRALNH
110 120 130 140 150
HVVVNDLPTL VWTANLAALE LHVLQWKVDA DGTRNPPDIL VFDLDPGEPA
160 170 180 190 200
TIVDCCRVAE LLHDVLRAEG LRPYPKTSGS KGLQLYCPVR VDSPKRTSEY
210 220 230 240 250
AKEIAQHMQA EHPESVVAKM AKAEREGKVF IDWSQNNTAK TTVAPYSLRA
260 270 280 290 300
RARPTVSTPV TWDEVRGCTK PDELVFTSDD VLRRLDRHGD LMADMEDSPT

PL
Length:302
Mass (Da):33,488
Last modified:April 17, 2007 - v1
Checksum:iE11C452A46CA8995
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM420293 Genomic DNA. Translation: CAM02823.1.
RefSeqiWP_009942151.1. NZ_ABFV01000001.1.

Genome annotation databases

EnsemblBacteriaiCAM02823; CAM02823; SACE_3549.
KEGGisen:SACE_3549.
PATRICi23414522. VBISacEry28377_3556.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM420293 Genomic DNA. Translation: CAM02823.1.
RefSeqiWP_009942151.1. NZ_ABFV01000001.1.

3D structure databases

ProteinModelPortaliA4FFJ8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi405948.SeryN2_010100000155.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAM02823; CAM02823; SACE_3549.
KEGGisen:SACE_3549.
PATRICi23414522. VBISacEry28377_3556.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
KOiK01971.
OMAiKIFIDWS.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL23338."
    Oliynyk M., Samborskyy M., Lester J.B., Mironenko T., Scott N., Dickens S., Haydock S.F., Leadlay P.F.
    Nat. Biotechnol. 25:447-453(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NRRL 23338Imported.

Entry informationi

Entry nameiA4FFJ8_SACEN
AccessioniPrimary (citable) accession number: A4FFJ8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: July 22, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.