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A4FD63 (A4FD63_SACEN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length259 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CAM01988.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4FD63 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: 5EF55BC1EAD22040

FASTA25928,820
        10         20         30         40         50         60 
MLAETVGGRR VVLDGEVVAC DVRGRPDFGR LQTRISRTQP SPLLVRQVPA VLLVFDLLMV 

        70         80         90        100        110        120 
DEVELLTVPY VERRERLAAL GLGGVGTVRM PEHYLDVTAE QLLAVAREHD LEGIVAKRVQ 

       130        140        150        160        170        180 
SRYRPGQRSR EWIKTAIRHT TNAVVGGWVT GSGAHRHVLG ALLLGVYGVD GRLHYAGHVG 

       190        200        210        220        230        240 
TGFSDRDRAV FAEGLAELAR PTSPFADPVP RELARYAQWV EPLIVAEVEY RQWTDDGRLR 

       250 
HPAFRQLHPE VTPASVRRP 

« Hide

References

[1]"Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL23338."
Oliynyk M., Samborskyy M., Lester J.B., Mironenko T., Scott N., Dickens S., Haydock S.F., Leadlay P.F.
Nat. Biotechnol. 25:447-453(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NRRL 23338.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM420293 Genomic DNA. Translation: CAM01988.1.
RefSeqYP_001104913.1. NC_009142.1.

3D structure databases

ProteinModelPortalA4FD63.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING405948.SACE_2706.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAM01988; CAM01988; SACE_2706.
GeneID4942537.
KEGGsen:SACE_2706.
PATRIC23412810. VBISacEry28377_2700.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222509.
KOK01971.
OMAGKPSFHE.
OrthoDBEOG661H49.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4FD63_SACEN
AccessionPrimary (citable) accession number: A4FD63
Entry history
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: May 14, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)