A4D862 (A4D862_PIG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Interleukin 6 EMBL AEQ59457.1

Submitted name:
Interleukin-6 Ensembl ENSSSCP00000024026 Ensembl ENSSSCP00000023819
Submitted name:
Interleukin-6 protein EMBL ABH04420.1

Gene names

Name:	IL6 Ensembl ENSSSCP00000024026 Ensembl ENSSSCP00000023819 EMBL CAM58482.1
Synonyms:	IL-6 EMBL AFK92986.1

Organism

Sus scrofa (Pig) [Reference proteome]

Taxonomic identifier

9823 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Cetartiodactyla › Suina › Suidae › Sus

Protein attributes

Sequence length	212 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	immune response Inferred from electronic annotation. Source: InterPro
Cellular_component	extracellular region Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4D862 [UniParc]. Last modified April 3, 2007. Version 1. Checksum: EF100ED030B6FDD0	FASTA	212	23,881
	10 20 30 40 50 60 MNSLSTSAFS PVAFSLGLLL VMATAFPTPG RLEEDAKGDA TSDKMLFTSP DKTEELIKYI 70 80 90 100 110 120 LGKISAMRKE MCEKYEKCEN SKEVLAENNL NLPKMAEKDG CFQSGFNQET CLMRITTGLV 130 140 150 160 170 180 EFQIYLDYLQ KEYESNKGNV EAVQISTKAL IQTLRQKGKN PDKATTPNPT TNAGLLDKLQ 190 200 210 SQNEWMKNTK IILILRSLED FLQFSLRAIR IM

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Cloning and sequencing of Rongchang porcine interleukin-6." Hua W., Zhu G.W., Fang Z. Heilongjiang Xu Mu Shou Yi 0:0-0(2007) Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Molecular characterization and SNP development for the porcine IL6 and IL10 genes." Danilowicz E., Akouchekian M., Dr..gem..ller C., Haase B., Kuiper H., Distl O., Leeb T. Anim. Biotechnol. 19:159-165(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[3]	Porcine genome sequencing project Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[4]	Zeng Z.Y., Zhou L., Liu Z.J. Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	Huo J.L., Wang P. Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[6]	Ensembl Submitted (MAY-2012) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP102180 Genomic DNA. No translation available. FP312822 Genomic DNA. No translation available. DQ832259 mRNA. Translation: ABH04420.1. JF906513 mRNA. Translation: AEQ59457.1. JQ839263 mRNA. Translation: AFK92986.1. AM501528 Genomic DNA. Translation: CAM58482.1.
RefSeq	NP_001239358.1. NM_001252429.1. NP_999564.1. NM_214399.1.
UniGene	Ssc.62.
3D structure databases
SMR	A4D862. Positions 47-212.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSSSCT00000023544; ENSSSCP00000023819; ENSSSCG00000020970. ENSSSCT00000025647; ENSSSCP00000024026; ENSSSCG00000027850.
GeneID	100628202. 399500.
KEGG	ssc:100628202. ssc:399500.
Organism-specific databases
CTD	100136689. 3569.
Phylogenomic databases
GeneTree	ENSGT00390000000878.
HOVERGEN	HBG000471.
KO	K05405.
OMA	LQFSLRA.
Family and domain databases
Gene3D	1.20.1250.10. 1 hit.
InterPro	IPR009079. 4_helix_cytokine-like_core. IPR012351. 4_helix_cytokine_core. IPR003573. IL6_MGF_GCSF. IPR003574. Interleukin_6. [Graphical view]
PANTHER	PTHR11457. PTHR11457. 1 hit.
Pfam	PF00489. IL6. 1 hit. [Graphical view]
PIRSF	PIRSF001935. IL6_MGF_GCSF. 1 hit.
PRINTS	PR00433. IL6GCSFMGF. PR00434. INTERLEUKIN6.
SMART	SM00126. IL6. 1 hit. [Graphical view]
SUPFAM	SSF47266. 4_helix_cytokine. 1 hit.
PROSITE	PS00254. INTERLEUKIN_6. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4D862_PIG

Accession

Primary (citable) accession number: A4D862

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	April 3, 2007
Last modified:	April 3, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)