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A4D299

- A4D299_HUMAN

UniProt

A4D299 - A4D299_HUMAN

Protein
Submitted name:

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa

Gene

TAF6

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (03 Apr 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: Ensembl

    GO - Biological processi

    1. DNA-templated transcription, initiation Source: InterPro
    2. regulation of sequence-specific DNA binding transcription factor activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDaImported
    Gene namesi
    Name:TAF6Imported
    ORF Names:tcag7.663Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: HPA
    2. nucleus Source: HPA

    PTM / Processingi

    Proteomic databases

    PRIDEiA4D299.

    Expressioni

    Gene expression databases

    ArrayExpressiA4D299.
    BgeeiA4D299.

    Structurei

    3D structure databases

    ProteinModelPortaliA4D299.
    SMRiA4D299. Positions 9-66.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000253001.
    HOVERGENiHBG012489.
    KOiK03131.

    Family and domain databases

    Gene3Di1.10.20.10. 1 hit.
    InterProiIPR016024. ARM-type_fold.
    IPR011442. DUF1546.
    IPR009072. Histone-fold.
    IPR004823. TAF_TATA-bd.
    [Graphical view]
    PfamiPF07571. DUF1546. 1 hit.
    PF02969. TAF. 1 hit.
    [Graphical view]
    SMARTiSM00803. TAF. 1 hit.
    [Graphical view]
    SUPFAMiSSF47113. SSF47113. 1 hit.
    SSF48371. SSF48371. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A4D299-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAEEKKLKLS NTVLPSESMK VVAESMGIAQ IQEETCQLLT DEDALKFMHM    50
    GKRQKLTTSD IDYALKLKNV EPLYGFHAQE FIPFRFASGG GRELYFYEEK 100
    EVDLSDIINT PLPRVPLDVC LKAHWLSIEG CQPAIPENPP PAPKEQQKAE 150
    ATEPLKSAKP GQEEDGPLKG KGQGATTADG KGKEKKAPPL LEGAPLRLKP 200
    RSIHELSVEQ QLYYKEITEA CVGSCEAKRA EALQSIATDP GLYQMLPRFS 250
    TFISEGVRVN VVQNNLALLI YLMRMVKALM DNPTLYLEKY VHELIPAVMT 300
    CIVSRQLCLR PDVDNHWALR DFAARLVAQI CKHFSTTTNN IQSRITKTFT 350
    KSWVDEKTPW TTRYGSIAGL AELGHDVIKT LILPRLQQEG ERIRSVLDGP 400
    VLSNIDRIGA DHVQSLLLKH CAPVLAKLRP PPDNQDAYRA EFGSLGPLLC 450
    SQVVKARAQA ALQAQQVNRT TLTITQPRPT LTLSQAPQPG PRTPGLLKVP 500
    GSIALPVQTL VSARAAAPPQ PSPPPTKFIV MSSSSSAPST QQVLSLSTSA 550
    PGSGSTTTSP VTTTVPSVQP IVKLVSTATT APPSTAPSGP GSVQKYIVVS 600
    LPPTGEGKGG PTSHPSPVPP PASSPSPLSG SALCGGKQEA GDSPPPAPGT 650
    PKANGSQPNS GSPQPAP 667
    Length:667
    Mass (Da):71,480
    Last modified:April 3, 2007 - v1
    Checksum:i7913E23A05CFA39C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH236956 Genomic DNA. Translation: EAL23853.1.
    RefSeqiXP_006716164.1. XM_006716101.1.
    XP_006716165.1. XM_006716102.1.
    UniGeneiHs.489309.

    Genome annotation databases

    GeneIDi6878.
    KEGGihsa:6878.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH236956 Genomic DNA. Translation: EAL23853.1 .
    RefSeqi XP_006716164.1. XM_006716101.1.
    XP_006716165.1. XM_006716102.1.
    UniGenei Hs.489309.

    3D structure databases

    ProteinModelPortali A4D299.
    SMRi A4D299. Positions 9-66.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi A4D299.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 6878.
    KEGGi hsa:6878.

    Organism-specific databases

    CTDi 6878.

    Phylogenomic databases

    HOGENOMi HOG000253001.
    HOVERGENi HBG012489.
    KOi K03131.

    Miscellaneous databases

    GenomeRNAii 6878.
    NextBioi 27032783.

    Gene expression databases

    ArrayExpressi A4D299.
    Bgeei A4D299.

    Family and domain databases

    Gene3Di 1.10.20.10. 1 hit.
    InterProi IPR016024. ARM-type_fold.
    IPR011442. DUF1546.
    IPR009072. Histone-fold.
    IPR004823. TAF_TATA-bd.
    [Graphical view ]
    Pfami PF07571. DUF1546. 1 hit.
    PF02969. TAF. 1 hit.
    [Graphical view ]
    SMARTi SM00803. TAF. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47113. SSF47113. 1 hit.
    SSF48371. SSF48371. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Human chromosome 7: DNA sequence and biology."
      Scherer S.W., Cheung J., MacDonald J.R., Osborne L.R., Nakabayashi K., Herbrick J.A., Carson A.R., Parker-Katiraee L., Skaug J., Khaja R., Zhang J., Hudek A.K., Li M., Haddad M., Duggan G.E., Fernandez B.A., Kanematsu E., Gentles S.
      , Christopoulos C.C., Choufani S., Kwasnicka D., Zheng X.H., Lai Z., Nusskern D., Zhang Q., Gu Z., Lu F., Zeesman S., Nowaczyk M.J., Teshima I., Chitayat D., Shuman C., Weksberg R., Zackai E.H., Grebe T.A., Cox S.R., Kirkpatrick S.J., Rahman N., Friedman J.M., Heng H.H., Pelicci P.G., Lo-Coco F., Belloni E., Shaffer L.G., Pober B., Morton C.C., Gusella J.F., Bruns G.A., Korf B.R., Quade B.J., Ligon A.H., Ferguson H., Higgins A.W., Leach N.T., Herrick S.R., Lemyre E., Farra C.G., Kim H.G., Summers A.M., Gripp K.W., Roberts W., Szatmari P., Winsor E.J., Grzeschik K.H., Teebi A., Minassian B.A., Kere J., Armengol L., Pujana M.A., Estivill X., Wilson M.D., Koop B.F., Tosi S., Moore G.E., Boright A.P., Zlotorynski E., Kerem B., Kroisel P.M., Petek E., Oscier D.G., Mould S.J., Dohner H., Dohner K., Rommens J.M., Vincent J.B., Venter J.C., Li P.W., Mural R.J., Adams M.D., Tsui L.C.
      Science 300:767-772(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiA4D299_HUMAN
    AccessioniPrimary (citable) accession number: A4D299
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 3, 2007
    Last sequence update: April 3, 2007
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.