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Protein

Uncharacterized protein C7orf72

Gene

C7orf72

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C7orf72
Gene namesi
Name:C7orf72
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 7

Organism-specific databases

HGNCiHGNC:22564. C7orf72.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165617678.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 438438Uncharacterized protein C7orf72PRO_0000331495Add
BLAST

Proteomic databases

PaxDbiA4D263.
PRIDEiA4D263.

PTM databases

PhosphoSiteiA4D263.

Expressioni

Gene expression databases

BgeeiA4D263.
GenevestigatoriA4D263.

Organism-specific databases

HPAiHPA026094.

Structurei

3D structure databases

ProteinModelPortaliA4D263.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG47117.
GeneTreeiENSGT00620000088090.
HOGENOMiHOG000169565.
HOVERGENiHBG108706.
InParanoidiA4D263.
OMAiGWTSPLK.
OrthoDBiEOG7RRF6W.
PhylomeDBiA4D263.
TreeFamiTF337635.

Family and domain databases

InterProiIPR027867. DUF4540.
[Graphical view]
PfamiPF15073. DUF4540. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4D263-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDVEIQDTPG KISISKRSIL SGTVENIDYP HYCDLLRKMN MPFVKGLENR
60 70 80 90 100
HNYGRFEKKC NPAFLKFHPY PPSVLPDYHL HDPYPPPYGP HYPLFPLRDD
110 120 130 140 150
VTLGDSCSGF MSPGGDADLN PGIGRTIPTL VDFSDVKPQH RVPRPDTGFQ
160 170 180 190 200
TTIKRQKILS EELQQNRRWN SREVPDISIR ARLGGWTSPL KVTPLQPHHE
210 220 230 240 250
GRSLSHIFTF DEEATCTDEG EPLVQTNKKC NAKDSFYKSS TQKAYEDVPW
260 270 280 290 300
DKMLPPKLVP EETTLEKTAD PISQCFTLKR YKGVPAITQM VGELWDRFQT
310 320 330 340 350
RSFLAPVKPI NFVSSSSRSK YIPLYTGHVQ STNADDVDNP LGDIASLAKQ
360 370 380 390 400
RYSKPLYTNT SRAANIPGYT GKVHFTATHP ANSNIPSTTP SPDSELHRVF
410 420 430
QKEMAVDLFR HQAPLSRLVT TVRPYNPFNK KDKETIDY
Length:438
Mass (Da):49,672
Last modified:November 24, 2009 - v2
Checksum:iA3B9EB7CF50F615C
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti268 – 2681T → A in EAL23902. (PubMed:12690205)Curated
Sequence conflicti358 – 3581T → I in EAL23902. (PubMed:12690205)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC020743 Genomic DNA. No translation available.
AC034148 Genomic DNA. No translation available.
CH236955 Genomic DNA. Translation: EAL23902.1.
CCDSiCCDS47585.1.
UniGeneiHs.99248.

Genome annotation databases

EnsembliENST00000297001; ENSP00000297001; ENSG00000164500.
UCSCiuc011kcj.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC020743 Genomic DNA. No translation available.
AC034148 Genomic DNA. No translation available.
CH236955 Genomic DNA. Translation: EAL23902.1.
CCDSiCCDS47585.1.
UniGeneiHs.99248.

3D structure databases

ProteinModelPortaliA4D263.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiA4D263.

Proteomic databases

PaxDbiA4D263.
PRIDEiA4D263.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000297001; ENSP00000297001; ENSG00000164500.
UCSCiuc011kcj.2. human.

Organism-specific databases

GeneCardsiGC07P050108.
HGNCiHGNC:22564. C7orf72.
HPAiHPA026094.
neXtProtiNX_A4D263.
PharmGKBiPA165617678.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG47117.
GeneTreeiENSGT00620000088090.
HOGENOMiHOG000169565.
HOVERGENiHBG108706.
InParanoidiA4D263.
OMAiGWTSPLK.
OrthoDBiEOG7RRF6W.
PhylomeDBiA4D263.
TreeFamiTF337635.

Miscellaneous databases

NextBioi21551490.

Gene expression databases

BgeeiA4D263.
GenevestigatoriA4D263.

Family and domain databases

InterProiIPR027867. DUF4540.
[Graphical view]
PfamiPF15073. DUF4540. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence of human chromosome 7."
    Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L.
    , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
    Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Human chromosome 7: DNA sequence and biology."
    Scherer S.W., Cheung J., MacDonald J.R., Osborne L.R., Nakabayashi K., Herbrick J.-A., Carson A.R., Parker-Katiraee L., Skaug J., Khaja R., Zhang J., Hudek A.K., Li M., Haddad M., Duggan G.E., Fernandez B.A., Kanematsu E., Gentles S.
    , Christopoulos C.C., Choufani S., Kwasnicka D., Zheng X.H., Lai Z., Nusskern D.R., Zhang Q., Gu Z., Lu F., Zeesman S., Nowaczyk M.J., Teshima I., Chitayat D., Shuman C., Weksberg R., Zackai E.H., Grebe T.A., Cox S.R., Kirkpatrick S.J., Rahman N., Friedman J.M., Heng H.H.Q., Pelicci P.G., Lo-Coco F., Belloni E., Shaffer L.G., Pober B., Morton C.C., Gusella J.F., Bruns G.A.P., Korf B.R., Quade B.J., Ligon A.H., Ferguson H., Higgins A.W., Leach N.T., Herrick S.R., Lemyre E., Farra C.G., Kim H.-G., Summers A.M., Gripp K.W., Roberts W., Szatmari P., Winsor E.J.T., Grzeschik K.-H., Teebi A., Minassian B.A., Kere J., Armengol L., Pujana M.A., Estivill X., Wilson M.D., Koop B.F., Tosi S., Moore G.E., Boright A.P., Zlotorynski E., Kerem B., Kroisel P.M., Petek E., Oscier D.G., Mould S.J., Doehner H., Doehner K., Rommens J.M., Vincent J.B., Venter J.C., Li P.W., Mural R.J., Adams M.D., Tsui L.-C.
    Science 300:767-772(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiCG072_HUMAN
AccessioniPrimary (citable) accession number: A4D263
Secondary accession number(s): A6NDX9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: November 24, 2009
Last modified: January 7, 2015
This is version 44 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.