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A4CQ97 (A4CQ97_ROBBH) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:RB2501_02110
OrganismRobiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) [Complete proteome] [HAMAP] EMBL EAR14182.1
Taxonomic identifier313596 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Robiginitalea ›

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
A4CQ97 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: 473FA3AE33C630FA

FASTA39543,210
        10         20         30         40         50         60 
MAKETFDRSK PHLNIGTIGH VDHGKTTLTA AITTVLANAG LSDIRSFDSI DNAPEEKERG 

        70         80         90        100        110        120 
ITINTSHVEY QTENRHYAHV DCPGHADYVK NMVTGAAQMD GAILVVAATD GPMPQTREHI 

       130        140        150        160        170        180 
LLGRQVGIPR IVVFLNKVDM VDDEELLELV EMEVRELLSF YEYDGDNSPV ISGSALGALN 

       190        200        210        220        230        240 
GEQKWVDTVM ELMKAVDEWI ELPQRDVDKD FLMPVEDVFT ITGRGTVATG RIETGVASTG 

       250        260        270        280        290        300 
DAVDIIGMGA EKLSSTITGV EMFRKILDRG EAGDNVGILL RGIEKKDIKR GMVICKPGSV 

       310        320        330        340        350        360 
TPHAKFEAEV YILKKEEGGR HTPFHNNYRP QFYVRTTDVT GTINLPDGVE MVMPGDNLTI 

       370        380        390 
TVDLIQPIAL NVGLRFAIRE GGRTVGAGQV TKILD

« Hide

References

[1]"Complete genome sequence of Robiginitalea biformata HTCC2501."
Oh H.M., Giovannoni S.J., Lee K., Ferriera S., Johnson J., Cho J.C.
J. Bacteriol. 191:7144-7145(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-864 / HTCC2501 / KCTC 12146.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001712 Genomic DNA. Translation: EAR14182.1.
RefSeqYP_003196644.1. NC_013222.1.

3D structure databases

ProteinModelPortalA4CQ97.
SMRA4CQ97. Positions 2-395.
ModBaseSearch...

Protein-protein interaction databases

STRING313596.RB2501_02110.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEAR14182; EAR14182; RB2501_02110.
GeneID8457368.
KEGGrbi:RB2501_02110.
PATRIC23337331. VBIRobBif55773_2914.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
ProtClustDBPRK12735.

Enzyme and pathway databases

BioCycRBIF313596:GH7G-3014-MONOMER.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4CQ97_ROBBH
AccessionPrimary (citable) accession number: A4CQ97
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: May 1, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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