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Protein
Submitted name:

Copper/Zinc superoxide dismutase

Gene

RB2501_00596

Organism
Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRBIF313596:GH7G-2709-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Copper/Zinc superoxide dismutaseImported
Gene namesi
Ordered Locus Names:RB2501_00596Imported
OrganismiRobiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)Imported
Taxonomic identifieri313596 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRobiginitalea
Proteomesi
  • UP000009049 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi313596.RB2501_00596.

Structurei

3D structure databases

ProteinModelPortaliA4CNR2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini58 – 191Sod_CuInterPro annotationAdd BLAST134

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili19 – 50Sequence analysisAdd BLAST32

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4108Z7T. Bacteria.
COG2032. LUCA.
HOGENOMiHOG000263448.
KOiK04565.
OMAiITETPYG.
OrthoDBiPOG091H05EB.

Family and domain databases

CDDicd00305. Cu-Zn_Superoxide_Dismutase. 1 hit.
Gene3Di2.60.40.200. 1 hit.
InterProiIPR024134. SOD_Cu/Zn_/chaperone.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERiPTHR10003. PTHR10003. 1 hit.
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

A4CNR2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKTTISVIA LLFAISFSCK ETKKEADAAA DEMEENMETV TEEVSEEIVK
60 70 80 90 100
FTMEPKSDSG VQGDVSFTEK DGTVMMEASF TGLSAGEHAI HIHQNADCSA
110 120 130 140 150
ADGTSAGGHW NPTGEPHGQW GDEAGYHKGD IGNFTAAEDG TATVEFETDQ
160 170 180 190
WCLGCEDPNK NIIGKAVIVH QGADDFTSQP SGAAGARVSC TGIIQ
Length:195
Mass (Da):20,608
Last modified:April 3, 2007 - v1
Checksum:i6B53C92702E35163
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001712 Genomic DNA. Translation: EAR14529.1.
RefSeqiWP_015755317.1. NC_013222.1.

Genome annotation databases

EnsemblBacteriaiEAR14529; EAR14529; RB2501_00596.
KEGGirbi:RB2501_00596.
PATRICi23336737. VBIRobBif55773_2621.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001712 Genomic DNA. Translation: EAR14529.1.
RefSeqiWP_015755317.1. NC_013222.1.

3D structure databases

ProteinModelPortaliA4CNR2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi313596.RB2501_00596.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEAR14529; EAR14529; RB2501_00596.
KEGGirbi:RB2501_00596.
PATRICi23336737. VBIRobBif55773_2621.

Phylogenomic databases

eggNOGiENOG4108Z7T. Bacteria.
COG2032. LUCA.
HOGENOMiHOG000263448.
KOiK04565.
OMAiITETPYG.
OrthoDBiPOG091H05EB.

Enzyme and pathway databases

BioCyciRBIF313596:GH7G-2709-MONOMER.

Family and domain databases

CDDicd00305. Cu-Zn_Superoxide_Dismutase. 1 hit.
Gene3Di2.60.40.200. 1 hit.
InterProiIPR024134. SOD_Cu/Zn_/chaperone.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERiPTHR10003. PTHR10003. 1 hit.
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA4CNR2_ROBBH
AccessioniPrimary (citable) accession number: A4CNR2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: November 2, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.