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A4CNH0

- A4CNH0_ROBBH

UniProt

A4CNH0 - A4CNH0_ROBBH

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Protein

Alpha-amylase

Gene

RB2501_00136

Organism
Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciRBIF313596:GH7G-2620-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:RB2501_00136Imported
OrganismiRobiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)Imported
Taxonomic identifieri313596 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRobiginitalea
ProteomesiUP000009049: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi313596.RB2501_00136.

Structurei

3D structure databases

ProteinModelPortaliA4CNH0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

A4CNH0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MHRLLLILAL SVSIYSCKPE PKTAQLPATE QVADQGRDSV PFLWEAANIY
60 70 80 90 100
FLLTDRFRNG NPENDLNFDR VNPTGPLRGF MGGDLAGITE KIKDGYFTDL
110 120 130 140 150
GINAIWFTPV VEQVHGDTDE GTGNTYAYHG YWAKDWTALD PNFGTRDELA
160 170 180 190 200
ELVAAAHAKG IRILMDVVLN HTGPVTGEDP AWPESWVRLD PTCNFEDYQG
210 220 230 240 250
TTACTLVENL PDIRTESSEA VVLPDALLAK WKAEGRLSEE LDELQVFFDR
260 270 280 290 300
TGYPRAPRYY IIKWLTDYVN DLGIDGFRVD TAKHVNEDAW SELYREAAYA
310 320 330 340 350
FQSWKRKHPG KVLDDTPFYM VGEVYGYGAS SGRDYDFGDR TVDYFDHGFK
360 370 380 390 400
SLINFELKSD AGQSYDRIFE KYSTLLHDDL NGLGIVNYLS SHDDGSPFDP
410 420 430 440 450
DRSKPFRSAN ILLLTPGASQ VYYGDESARG LVVEGTVGDA TLRSFMNWEE
460 470 480 490 500
LDSLPEKQEI LAHWQKLGQF RNHHPAIGAG RHKRLASQPY VFSRTYTDGD
510 520 530 540 550
YRDKVAVGLD LPEGPKSLYV RGFFGDGTVL RDAYSGSEAT VSGGRVELDT
560
PYPIALLELA D
Length:561
Mass (Da):62,894
Last modified:April 3, 2007 - v1
Checksum:iC02AE128B94CBC05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001712 Genomic DNA. Translation: EAR14437.1.
RefSeqiYP_003196251.1. NC_013222.1.

Genome annotation databases

EnsemblBacteriaiEAR14437; EAR14437; RB2501_00136.
GeneIDi8456972.
KEGGirbi:RB2501_00136.
PATRICi23336551. VBIRobBif55773_2528.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001712 Genomic DNA. Translation: EAR14437.1 .
RefSeqi YP_003196251.1. NC_013222.1.

3D structure databases

ProteinModelPortali A4CNH0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 313596.RB2501_00136.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai EAR14437 ; EAR14437 ; RB2501_00136 .
GeneIDi 8456972.
KEGGi rbi:RB2501_00136.
PATRICi 23336551. VBIRobBif55773_2528.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000273912.
KOi K01176.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci RBIF313596:GH7G-2620-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 2 hits.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Robiginitalea biformata HTCC2501."
    Oh H.M., Giovannoni S.J., Lee K., Ferriera S., Johnson J., Cho J.C.
    J. Bacteriol. 191:7144-7145(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-864 / HTCC2501 / KCTC 12146Imported.

Entry informationi

Entry nameiA4CNH0_ROBBH
AccessioniPrimary (citable) accession number: A4CNH0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: October 1, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3