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A4CNH0

- A4CNH0_ROBBH

UniProt

A4CNH0 - A4CNH0_ROBBH

Protein

Alpha-amylase

Gene

RB2501_00136

Organism
Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (03 Apr 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciRBIF313596:GH7G-2620-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:RB2501_00136Imported
    OrganismiRobiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)Imported
    Taxonomic identifieri313596 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRobiginitalea
    ProteomesiUP000009049: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi313596.RB2501_00136.

    Structurei

    3D structure databases

    ProteinModelPortaliA4CNH0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000273912.
    KOiK01176.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di3.20.20.80. 2 hits.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    A4CNH0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MHRLLLILAL SVSIYSCKPE PKTAQLPATE QVADQGRDSV PFLWEAANIY    50
    FLLTDRFRNG NPENDLNFDR VNPTGPLRGF MGGDLAGITE KIKDGYFTDL 100
    GINAIWFTPV VEQVHGDTDE GTGNTYAYHG YWAKDWTALD PNFGTRDELA 150
    ELVAAAHAKG IRILMDVVLN HTGPVTGEDP AWPESWVRLD PTCNFEDYQG 200
    TTACTLVENL PDIRTESSEA VVLPDALLAK WKAEGRLSEE LDELQVFFDR 250
    TGYPRAPRYY IIKWLTDYVN DLGIDGFRVD TAKHVNEDAW SELYREAAYA 300
    FQSWKRKHPG KVLDDTPFYM VGEVYGYGAS SGRDYDFGDR TVDYFDHGFK 350
    SLINFELKSD AGQSYDRIFE KYSTLLHDDL NGLGIVNYLS SHDDGSPFDP 400
    DRSKPFRSAN ILLLTPGASQ VYYGDESARG LVVEGTVGDA TLRSFMNWEE 450
    LDSLPEKQEI LAHWQKLGQF RNHHPAIGAG RHKRLASQPY VFSRTYTDGD 500
    YRDKVAVGLD LPEGPKSLYV RGFFGDGTVL RDAYSGSEAT VSGGRVELDT 550
    PYPIALLELA D 561
    Length:561
    Mass (Da):62,894
    Last modified:April 3, 2007 - v1
    Checksum:iC02AE128B94CBC05
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001712 Genomic DNA. Translation: EAR14437.1.
    RefSeqiYP_003196251.1. NC_013222.1.

    Genome annotation databases

    EnsemblBacteriaiEAR14437; EAR14437; RB2501_00136.
    GeneIDi8456972.
    KEGGirbi:RB2501_00136.
    PATRICi23336551. VBIRobBif55773_2528.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001712 Genomic DNA. Translation: EAR14437.1 .
    RefSeqi YP_003196251.1. NC_013222.1.

    3D structure databases

    ProteinModelPortali A4CNH0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 313596.RB2501_00136.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai EAR14437 ; EAR14437 ; RB2501_00136 .
    GeneIDi 8456972.
    KEGGi rbi:RB2501_00136.
    PATRICi 23336551. VBIRobBif55773_2528.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000273912.
    KOi K01176.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci RBIF313596:GH7G-2620-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 2 hits.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Robiginitalea biformata HTCC2501."
      Oh H.M., Giovannoni S.J., Lee K., Ferriera S., Johnson J., Cho J.C.
      J. Bacteriol. 191:7144-7145(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-864 / HTCC2501 / KCTC 12146Imported.

    Entry informationi

    Entry nameiA4CNH0_ROBBH
    AccessioniPrimary (citable) accession number: A4CNH0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 3, 2007
    Last sequence update: April 3, 2007
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3