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A4CNH0 (A4CNH0_ROBBH) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length561 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4CNH0 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: C02AE128B94CBC05

FASTA56162,894
        10         20         30         40         50         60 
MHRLLLILAL SVSIYSCKPE PKTAQLPATE QVADQGRDSV PFLWEAANIY FLLTDRFRNG 

        70         80         90        100        110        120 
NPENDLNFDR VNPTGPLRGF MGGDLAGITE KIKDGYFTDL GINAIWFTPV VEQVHGDTDE 

       130        140        150        160        170        180 
GTGNTYAYHG YWAKDWTALD PNFGTRDELA ELVAAAHAKG IRILMDVVLN HTGPVTGEDP 

       190        200        210        220        230        240 
AWPESWVRLD PTCNFEDYQG TTACTLVENL PDIRTESSEA VVLPDALLAK WKAEGRLSEE 

       250        260        270        280        290        300 
LDELQVFFDR TGYPRAPRYY IIKWLTDYVN DLGIDGFRVD TAKHVNEDAW SELYREAAYA 

       310        320        330        340        350        360 
FQSWKRKHPG KVLDDTPFYM VGEVYGYGAS SGRDYDFGDR TVDYFDHGFK SLINFELKSD 

       370        380        390        400        410        420 
AGQSYDRIFE KYSTLLHDDL NGLGIVNYLS SHDDGSPFDP DRSKPFRSAN ILLLTPGASQ 

       430        440        450        460        470        480 
VYYGDESARG LVVEGTVGDA TLRSFMNWEE LDSLPEKQEI LAHWQKLGQF RNHHPAIGAG 

       490        500        510        520        530        540 
RHKRLASQPY VFSRTYTDGD YRDKVAVGLD LPEGPKSLYV RGFFGDGTVL RDAYSGSEAT 

       550        560 
VSGGRVELDT PYPIALLELA D 

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References

[1]"Complete genome sequence of Robiginitalea biformata HTCC2501."
Oh H.M., Giovannoni S.J., Lee K., Ferriera S., Johnson J., Cho J.C.
J. Bacteriol. 191:7144-7145(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-864 / HTCC2501 / KCTC 12146.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001712 Genomic DNA. Translation: EAR14437.1.
RefSeqYP_003196251.1. NC_013222.1.

3D structure databases

ProteinModelPortalA4CNH0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING313596.RB2501_00136.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEAR14437; EAR14437; RB2501_00136.
GeneID8456972.
KEGGrbi:RB2501_00136.
PATRIC23336551. VBIRobBif55773_2528.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000273912.
KOK01176.
OrthoDBEOG65QWH3.
ProtClustDBCLSK845526.

Enzyme and pathway databases

BioCycRBIF313596:GH7G-2620-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 2 hits.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameA4CNH0_ROBBH
AccessionPrimary (citable) accession number: A4CNH0
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: November 13, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)