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Protein

Xylose isomerase

Gene

xylA

Organism
Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationNote: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei106UniRule annotation1
Active sitei109UniRule annotation1
Metal bindingi237Magnesium 1UniRule annotation1
Metal bindingi273Magnesium 1UniRule annotation1
Metal bindingi273Magnesium 2UniRule annotation1
Metal bindingi276Magnesium 2UniRule annotation1
Metal bindingi301Magnesium 1UniRule annotation1
Metal bindingi312Magnesium 2UniRule annotation1
Metal bindingi314Magnesium 2UniRule annotation1
Metal bindingi344Magnesium 1UniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotationImported
Biological processCarbohydrate metabolism, Xylose metabolismUniRule annotationSAAS annotation
LigandMagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciRBIF313596:G1GFS-244-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotationSAAS annotation (EC:5.3.1.5UniRule annotationSAAS annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:RB2501_04540Imported
OrganismiRobiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)Imported
Taxonomic identifieri313596 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRobiginitalea
Proteomesi
  • UP000009049 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi313596.RB2501_04540

Structurei

3D structure databases

ProteinModelPortaliA4CGS8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105C93 Bacteria
COG2115 LUCA
HOGENOMiHOG000252293
KOiK01805
OMAiHTFQHEL
OrthoDBiPOG091H07LC

Family and domain databases

HAMAPiMF_00455 Xylose_isom_A, 1 hit
InterProiView protein in InterPro
IPR036237 Xyl_isomerase-like_sf
IPR013452 Xylose_isom_bac
IPR001998 Xylose_isomerase
PANTHERiPTHR32176:SF0 PTHR32176:SF0, 1 hit
PRINTSiPR00688 XYLOSISMRASE
SUPFAMiSSF51658 SSF51658, 1 hit
TIGRFAMsiTIGR02630 xylose_isom_A, 1 hit
PROSITEiView protein in PROSITE
PS51415 XYLOSE_ISOMERASE, 1 hit

Sequencei

Sequence statusi: Complete.

A4CGS8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MITTGDKEYF KNIGKIPFEG KESDNPLAFK YYDENQKVGD KTMKEHFRFA
60 70 80 90 100
VCYWHTFTGL GADPFGAPTQ QFPWLENSDP VQQAKDKMDA AFEFITKIGA
110 120 130 140 150
PYYCFHDYDL IAEGPTLAES ERRLDIITDY AREKMDASGV KLLWGTANCF
160 170 180 190 200
GNPRYMNGAA TNPDFKVLAA AGAQVKNALD ATIKLDGENY VFWGGREGYM
210 220 230 240 250
SLLNTDMKRE QDHMARFLHM ARDYARKQGF KGVFFIEPKP MEPTKHQYDF
260 270 280 290 300
DSATVLAFLS KYDLLDDFKL NIEVNHATLA QHTFEHELQV AADNGLLGSI
310 320 330 340 350
DANRGDYQNG WDTDQFPVDV YELTQAMLVI LEAGGFQGGG VNFDAKIRRN
360 370 380 390 400
STDLEDIFYA HIGGMDAFAR ALLAAHAVRT QSDFLKMRKD RYASFDSGKG
410 420 430 440
AEFEAGKLSL EDLHKFAGAN QEIPRTSGRQ ELYENIINQF I
Length:441
Mass (Da):49,844
Last modified:April 3, 2007 - v1
Checksum:i5F8537C7E025450B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001712 Genomic DNA Translation: EAR16136.1
RefSeqiWP_012813831.1, NC_013222.1

Genome annotation databases

EnsemblBacteriaiEAR16136; EAR16136; RB2501_04540
KEGGirbi:RB2501_04540

Similar proteinsi

Entry informationi

Entry nameiA4CGS8_ROBBH
AccessioniPrimary (citable) accession number: A4CGS8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: April 25, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health