Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A4CGS8

- A4CGS8_ROBBH

UniProt

A4CGS8 - A4CGS8_ROBBH

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Xylose isomerase

Gene

xylA

Organism
Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Note: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei106 – 1061UniRule annotation
Active sitei109 – 1091UniRule annotation
Metal bindingi237 – 2371Magnesium 1UniRule annotation
Metal bindingi273 – 2731Magnesium 1UniRule annotation
Metal bindingi273 – 2731Magnesium 2UniRule annotation
Metal bindingi276 – 2761Magnesium 2UniRule annotation
Metal bindingi301 – 3011Magnesium 1UniRule annotation
Metal bindingi312 – 3121Magnesium 2UniRule annotation
Metal bindingi314 – 3141Magnesium 2UniRule annotation
Metal bindingi344 – 3441Magnesium 1UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotation, Xylose metabolismUniRule annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciRBIF313596:GH7G-252-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:RB2501_04540Imported
OrganismiRobiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)Imported
Taxonomic identifieri313596 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRobiginitalea
ProteomesiUP000009049: Chromosome

Subcellular locationi

Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi313596.RB2501_04540.

Structurei

3D structure databases

ProteinModelPortaliA4CGS8.
SMRiA4CGS8. Positions 7-441.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2115.
HOGENOMiHOG000252293.
KOiK01805.
OrthoDBiEOG62NX4R.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4CGS8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MITTGDKEYF KNIGKIPFEG KESDNPLAFK YYDENQKVGD KTMKEHFRFA
60 70 80 90 100
VCYWHTFTGL GADPFGAPTQ QFPWLENSDP VQQAKDKMDA AFEFITKIGA
110 120 130 140 150
PYYCFHDYDL IAEGPTLAES ERRLDIITDY AREKMDASGV KLLWGTANCF
160 170 180 190 200
GNPRYMNGAA TNPDFKVLAA AGAQVKNALD ATIKLDGENY VFWGGREGYM
210 220 230 240 250
SLLNTDMKRE QDHMARFLHM ARDYARKQGF KGVFFIEPKP MEPTKHQYDF
260 270 280 290 300
DSATVLAFLS KYDLLDDFKL NIEVNHATLA QHTFEHELQV AADNGLLGSI
310 320 330 340 350
DANRGDYQNG WDTDQFPVDV YELTQAMLVI LEAGGFQGGG VNFDAKIRRN
360 370 380 390 400
STDLEDIFYA HIGGMDAFAR ALLAAHAVRT QSDFLKMRKD RYASFDSGKG
410 420 430 440
AEFEAGKLSL EDLHKFAGAN QEIPRTSGRQ ELYENIINQF I
Length:441
Mass (Da):49,844
Last modified:April 3, 2007 - v1
Checksum:i5F8537C7E025450B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001712 Genomic DNA. Translation: EAR16136.1.
RefSeqiYP_003193917.1. NC_013222.1.

Genome annotation databases

EnsemblBacteriaiEAR16136; EAR16136; RB2501_04540.
GeneIDi8454604.
KEGGirbi:RB2501_04540.
PATRICi23331909. VBIRobBif55773_0239.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001712 Genomic DNA. Translation: EAR16136.1 .
RefSeqi YP_003193917.1. NC_013222.1.

3D structure databases

ProteinModelPortali A4CGS8.
SMRi A4CGS8. Positions 7-441.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 313596.RB2501_04540.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai EAR16136 ; EAR16136 ; RB2501_04540 .
GeneIDi 8454604.
KEGGi rbi:RB2501_04540.
PATRICi 23331909. VBIRobBif55773_0239.

Phylogenomic databases

eggNOGi COG2115.
HOGENOMi HOG000252293.
KOi K01805.
OrthoDBi EOG62NX4R.

Enzyme and pathway databases

BioCyci RBIF313596:GH7G-252-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Robiginitalea biformata HTCC2501."
    Oh H.M., Giovannoni S.J., Lee K., Ferriera S., Johnson J., Cho J.C.
    J. Bacteriol. 191:7144-7145(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-864 / HTCC2501 / KCTC 12146Imported.

Entry informationi

Entry nameiA4CGS8_ROBBH
AccessioniPrimary (citable) accession number: A4CGS8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: November 26, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3