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Protein
Submitted name:

Alpha-amylase

Gene

CA2559_00080

Organism
Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi149Calcium 1UniRule annotation1
Active sitei237NucleophileUniRule annotation1
Active sitei261Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Ordered Locus Names:CA2559_00080Imported
OrganismiCroceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090)Imported
Taxonomic identifieri216432 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCroceibacter
Proteomesi
  • UP000002297 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_500266019323 – 456Sequence analysisAdd BLAST434

Interactioni

Protein-protein interaction databases

STRINGi216432.CA2559_00080.

Structurei

3D structure databases

ProteinModelPortaliA3U4D8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini49 – 394AamyInterPro annotationAdd BLAST346

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105E5K. Bacteria.
COG0366. LUCA.
HOGENOMiHOG000031038.
KOiK01176.
OMAiVLNHKMG.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 2 hits.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

A3U4D8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNYYKYSAL LLIALFLFSC NKDESFTETE TTSEESELTV NAMATIGSGV
60 70 80 90 100
MMQAFYWDVP AGGTWWNTVN GKLQNWSNAG IDAIWLPPVS KAQNGPFSMG
110 120 130 140 150
YDPFDYYDFG EYDQMGSVET RFGSRTELES LISTAHNNGI SVIADIVINH
160 170 180 190 200
NSGGASESNV FTGSDTYTDY NPASGIFYRT QYDFHPNDYH NNDSGAFGGF
210 220 230 240 250
PDLCHHKSYV QDHLWNNPNS VAKYYKNVLG FDGWRFDYVK GFEPWVVNSW
260 270 280 290 300
TNAVGGFSVG EYWDANVNTL EWWVNNSGSS AFDFACYYRM RDAFQNNDLN
310 320 330 340 350
NLSGDMLWKR NANKAVTFVA NHDTDEIFNN KLLAYAYILT HEGYPTLFYK
360 370 380 390 400
DYEEWLDKNK LNNLIWIHNN LAGGSTINLY TDVDEYIAKR NGYNNNGLVV
410 420 430 440 450
YLNISNNWQE RWVQTNWNST RIKDYTGNSS WEPVTQADGW VKIQVPPNGY

SVWSVK
Length:456
Mass (Da):52,137
Last modified:April 3, 2007 - v1
Checksum:i198615A6A9B48D74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002046 Genomic DNA. Translation: EAP87105.1.
RefSeqiWP_013185787.1. NC_014230.1.

Genome annotation databases

EnsemblBacteriaiEAP87105; EAP87105; CA2559_00080.
KEGGicat:CA2559_00080.

Similar proteinsi

Entry informationi

Entry nameiA3U4D8_CROAH
AccessioniPrimary (citable) accession number: A3U4D8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: August 30, 2017
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported