A3TLR3 (A3TLR3_9MICO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
N utilization substance protein B homolog HAMAP-Rule MF_00073
Short name=Protein NusB HAMAP-Rule MF_00073

Gene names

Name:	nusB HAMAP-Rule MF_00073
ORF Names:	JNB_04080 EMBL EAP99318.1

Organism

Janibacter sp. HTCC2649 EMBL EAP99318.1

Taxonomic identifier

313589 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Intrasporangiaceae › Janibacter

Protein attributes

Sequence length	136 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Involved in the transcription termination process By similarity. HAMAP-Rule MF_00073 SAAS SAAS011605
Sequence similarities	Belongs to the NusB family. HAMAP-Rule MF_00073
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Biological process	Transcription Transcription regulation Transcription termination HAMAP-Rule MF_00073 SAAS SAAS011605
Gene Ontology (GO)
Biological_process	DNA-dependent transcription, termination Inferred from electronic annotation. Source: HAMAP regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3TLR3 [UniParc]. Last modified April 3, 2007. Version 1. Checksum: A1171D3A46A45829	FASTA	136	14,823
	10 20 30 40 50 60 MGARTKSRRR AIDLLFEAEQ RQVNATELLK ERLATPVTEA PLNEFTANLV TGVVDNWSQI 70 80 90 100 110 120 NDLLATYSQG WSVERMPAVD RAILRVGAFE VLFGEVPEGV AIAEAVAIAT ELSTDDSPKF 130 VNGLLARLAE VKPTLA

References

[1]	"Genome sequence of the Marine Janibacter Sp. Strain HTCC2649." Thrash J.C., Cho J.C., Bertagnolli A.D., Ferriera S., Johnson J., Vergin K.L., Giovannoni S.J. J. Bacteriol. 193:584-585(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: HTCC2649 EMBL EAP99318.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAMN01000002 Genomic DNA. Translation: EAP99318.1.
3D structure databases
ProteinModelPortal	A3TLR3.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EAP99318; EAP99318; JNB_04080.
PATRIC	27559630. VBIJanSp77695_0764.
Family and domain databases
Gene3D	1.10.940.10. 1 hit.
HAMAP	MF_00073. NusB.
InterPro	IPR011605. NusB_fam. IPR006027. NusB_RsmB_TIM44. [Graphical view]
PANTHER	PTHR11078. PTHR11078. 1 hit.
Pfam	PF01029. NusB. 1 hit. [Graphical view]
SUPFAM	SSF48013. NusB_RsmB_TIM44. 1 hit.
TIGRFAMs	TIGR01951. nusB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3TLR3_9MICO

Accession

Primary (citable) accession number: A3TLR3

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	April 3, 2007
Last modified:	April 3, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)