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Protein
Submitted name:

Mandelate racemase/muconate lactonizing enzyme, putative

Gene

ISM_14065

Organism
Roseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi194 – 1941MagnesiumCombined sources
Metal bindingi218 – 2181MagnesiumCombined sources
Metal bindingi241 – 2411MagnesiumCombined sources
Metal bindingi242 – 2421MagnesiumCombined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

MagnesiumCombined sources, Metal-bindingCombined sourcesSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Mandelate racemase/muconate lactonizing enzyme, putativeImported
Gene namesi
ORF Names:ISM_14065Imported
OrganismiRoseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM)Imported
Taxonomic identifieri89187 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRoseovarius
Proteomesi
  • UP000005954 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi89187.ISM_14065.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2QDDX-ray2.30A/B2-368[»]
3FVDX-ray2.30A/B2-368[»]
ProteinModelPortaliA3SNF7.
SMRiA3SNF7. Positions 1-368.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiA3SNF7.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini144 – 23794MR_MLEInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4107WEA. Bacteria.
ENOG41107K3. LUCA.

Family and domain databases

Gene3Di3.20.20.120. 1 hit.
3.30.390.10. 1 hit.
InterProiIPR029065. Enolase_C-like.
IPR029017. Enolase_N-like.
IPR013342. Mandelate_racemase_C.
IPR013341. Mandelate_racemase_N_dom.
IPR001354. MR/MLE/MAL.
[Graphical view]
PANTHERiPTHR13794. PTHR13794. 1 hit.
PfamiPF13378. MR_MLE_C. 1 hit.
PF02746. MR_MLE_N. 1 hit.
[Graphical view]
SMARTiSM00922. MR_MLE. 1 hit.
[Graphical view]
SUPFAMiSSF51604. SSF51604. 1 hit.
SSF54826. SSF54826. 1 hit.

Sequencei

Sequence statusi: Complete.

A3SNF7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRITRLTVFH LDLPLAKPYW LSGGRLKFDR LDSTYLRIDT DEGVTGWGEG
60 70 80 90 100
CPWGHSYLPA HGPGLRAGIA TLAPHLLGLD PRSLDHVNRV MDLQLPGHSY
110 120 130 140 150
VKSPIDMACW DILGQVAGLP LWQLLGGEAA TPVPINSSIS TGTPDQMLGL
160 170 180 190 200
IAEAAAQGYR THSAKIGGSD PAQDIARIEA ISAGLPDGHR VTFDVNRAWT
210 220 230 240 250
PAIAVEVLNS VRARDWIEQP CQTLDQCAHV ARRVANPIML DECLHEFSDH
260 270 280 290 300
LAAWSRGACE GVKIKPNRVG GLTRARQIRD FGVSVGWQMH IEDVGGTALA
310 320 330 340 350
DTAALHLAAS TPEANRLASW LGHAHLADDP IPGQGARNRD GLATPPSAPG
360
LGVIPDPEAL GRPVASYD
Length:368
Mass (Da):39,416
Last modified:April 3, 2007 - v1
Checksum:i501F75A3A06EEF99
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AALY01000002 Genomic DNA. Translation: EAP75997.1.
RefSeqiWP_009814822.1. NZ_CH724156.1.

Genome annotation databases

EnsemblBacteriaiEAP75997; EAP75997; ISM_14065.
PATRICi28131175. VBIRosNub115512_2805.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AALY01000002 Genomic DNA. Translation: EAP75997.1.
RefSeqiWP_009814822.1. NZ_CH724156.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2QDDX-ray2.30A/B2-368[»]
3FVDX-ray2.30A/B2-368[»]
ProteinModelPortaliA3SNF7.
SMRiA3SNF7. Positions 1-368.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi89187.ISM_14065.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEAP75997; EAP75997; ISM_14065.
PATRICi28131175. VBIRosNub115512_2805.

Phylogenomic databases

eggNOGiENOG4107WEA. Bacteria.
ENOG41107K3. LUCA.

Miscellaneous databases

EvolutionaryTraceiA3SNF7.

Family and domain databases

Gene3Di3.20.20.120. 1 hit.
3.30.390.10. 1 hit.
InterProiIPR029065. Enolase_C-like.
IPR029017. Enolase_N-like.
IPR013342. Mandelate_racemase_C.
IPR013341. Mandelate_racemase_N_dom.
IPR001354. MR/MLE/MAL.
[Graphical view]
PANTHERiPTHR13794. PTHR13794. 1 hit.
PfamiPF13378. MR_MLE_C. 1 hit.
PF02746. MR_MLE_N. 1 hit.
[Graphical view]
SMARTiSM00922. MR_MLE. 1 hit.
[Graphical view]
SUPFAMiSSF51604. SSF51604. 1 hit.
SSF54826. SSF54826. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Zheng H., Yogo Y.
    Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-591 / DSM 15170 / ISMImported.
  2. "Crystal structure of a member of enolase superfamily from Roseovarius nubinhibens ISM."
    Patskovsky Y., Bonanno J., Sauder J.M., Gilmore J.M., Iizuka M., Groshong C., Gheyi T., Sojitra S., Wasserman S.R., Koss J., Gerlt J., Burley S.K., Almo S.C.
    Submitted (JUN-2007) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 2-368.
  3. "Crystal structure of a member of enolase superfamily from ROSEOVARIUS NUBINHIBENS ISM complexed with magnesium."
    Malashkevich V.N., Rutter M., Bain K.T., Lau C., Ozyurt S., Smith D., Wasserman S., Sauder J.M., Burley S.K., Almo S.C.
    Submitted (JAN-2009) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 2-368 IN COMPLEX WITH MAGNESIUM.

Entry informationi

Entry nameiA3SNF7_ROSNI
AccessioniPrimary (citable) accession number: A3SNF7
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: July 6, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.