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Protein
Submitted name:

Uncharacterized protein

Gene

ISM_01780

Organism
Roseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi92 – 921CalciumCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:ISM_01780Imported
OrganismiRoseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM)Imported
Taxonomic identifieri89187 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRoseovarius
Proteomesi
  • UP000005954 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi89187.ISM_01780.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3BVCX-ray2.75A/B6-206[»]
ProteinModelPortaliA3SHZ8.
SMRiA3SHZ8. Positions 6-206.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiA3SHZ8.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105H69. Bacteria.
ENOG410XRAU. LUCA.

Family and domain databases

InterProiIPR012668. CHP02466.
[Graphical view]
PfamiPF13759. 2OG-FeII_Oxy_5. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02466. TIGR02466. 1 hit.

Sequencei

Sequence statusi: Complete.

A3SHZ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQISSLFVT RLYHAPLSDH GPAIDAEEME SSCYAIAEDD EAGQGWCEEN
60 70 80 90 100
GYPGYTSYAS LTDLPWRFPI FADLVKSLDA HVAAFAEDLE FDLDGRALEL
110 120 130 140 150
EDLWINILPE GGSHASHIHP HSVISGTTYV SMPGGTSALK LEDPRHAMMM
160 170 180 190 200
AAPARRKTAR DELRQFIYVT PAVGDVLLWE SWLRHEVPMN MSEDDRISVS

FNYRWA
Length:206
Mass (Da):23,075
Last modified:April 3, 2007 - v1
Checksum:i71AA62784DA08215
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AALY01000001 Genomic DNA. Translation: EAP76979.1.
RefSeqiWP_009812383.1. NZ_CH724156.1.

Genome annotation databases

EnsemblBacteriaiEAP76979; EAP76979; ISM_01780.
PATRICi28126211. VBIRosNub115512_0357.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AALY01000001 Genomic DNA. Translation: EAP76979.1.
RefSeqiWP_009812383.1. NZ_CH724156.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3BVCX-ray2.75A/B6-206[»]
ProteinModelPortaliA3SHZ8.
SMRiA3SHZ8. Positions 6-206.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi89187.ISM_01780.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEAP76979; EAP76979; ISM_01780.
PATRICi28126211. VBIRosNub115512_0357.

Phylogenomic databases

eggNOGiENOG4105H69. Bacteria.
ENOG410XRAU. LUCA.

Miscellaneous databases

EvolutionaryTraceiA3SHZ8.

Family and domain databases

InterProiIPR012668. CHP02466.
[Graphical view]
PfamiPF13759. 2OG-FeII_Oxy_5. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02466. TIGR02466. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Zheng H., Yogo Y.
    Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-591 / DSM 15170 / ISMImported.
  2. "Crystal structure of an uncharacterized protein Ism_01780 from Roseovarius nubinhibens."
    Patskovsky Y., Toro R., Meyer A.J., Rutter M., Iizuka M., Maletic M., Smith D., Wasserman S., Sauder J.M., Burley S.K., Almo S.C.
    Submitted (JAN-2008) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.75 ANGSTROMS) OF 6-206 IN COMPLEX WITH CALCIUM.

Entry informationi

Entry nameiA3SHZ8_ROSNI
AccessioniPrimary (citable) accession number: A3SHZ8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: March 16, 2016
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.