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A3QHU0 (A3QHU0_SHELP) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.19 EMBL ABO25038.1
Gene names
Ordered Locus Names:Shew_3172 EMBL ABO25038.1
OrganismShewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP] EMBL ABO25038.1
Taxonomic identifier323850 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length426 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
A3QHU0 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: 7900242144C3AFD2

FASTA42645,163
        10         20         30         40         50         60 
MSNAELQARK VQAIARGQGN AYPVYVERAL NAELWDVEGK RYIDFGTGIA VCNTGHSHPK 

        70         80         90        100        110        120 
VVAAVKAQLD NFSHTCVMVN PYESAVALAE QLNRIAPGGS DKKAIFVTTG AEAVENCVKI 

       130        140        150        160        170        180 
ARAHTGRRGV IAFNGGFHGR TNLTMALTGK ITPYKHQFGP FAGDIFHAPY PVAFHGVSVK 

       190        200        210        220        230        240 
DSLKAIEHLF KVDIAPCDVA AIVVEPVQGE GGFYAAPPEF LQALRALCDQ HGIVLVMDEI 

       250        260        270        280        290        300 
QTGFGRTGKM FSCEHAGVEP DLMTMAKGIA GGFPLAAVVG KSEIMDAPLP GGLGGTYGGS 

       310        320        330        340        350        360 
PVGCVAALAV LEVMQEEQLV ERAVKIGDSF NQALSALKEQ YPQLIGEVRN QGAMIAMELV 

       370        380        390        400        410        420 
IDGDIEQPNT ALTQAIIANA AAHGLVLLAC GFYGNVIRFL PALTISDEIM AEGLAKFKTL 


FESLVD 

« Hide

References

[1]"Complete sequence of Shewanella loihica PV-4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G., Fredrickson J., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1088 / PV-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000606 Genomic DNA. Translation: ABO25038.1.
RefSeqYP_001095297.1. NC_009092.1.

3D structure databases

ProteinModelPortalA3QHU0.
SMRA3QHU0. Positions 2-424.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323850.Shew_3172.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABO25038; ABO25038; Shew_3172.
GeneID4921949.
KEGGslo:Shew_3172.
PATRIC23518259. VBISheLoi132094_3169.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK07250.
OMAMCGFYAE.
OrthoDBEOG6QVRHN.

Enzyme and pathway databases

BioCycSLOI323850:GHQJ-3277-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3QHU0_SHELP
AccessionPrimary (citable) accession number: A3QHU0
Entry history
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: May 14, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)