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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Shew_3172

Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSLOI323850:GHQJ-3277-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Ordered Locus Names:Shew_3172Imported
OrganismiShewanella loihica (strain ATCC BAA-1088 / PV-4)Imported
Taxonomic identifieri323850 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001558 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi323850.Shew_3172.

Structurei

3D structure databases

ProteinModelPortaliA3QHU0.
SMRiA3QHU0. Positions 2-424.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiYHAQYPN.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3QHU0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNAELQARK VQAIARGQGN AYPVYVERAL NAELWDVEGK RYIDFGTGIA
60 70 80 90 100
VCNTGHSHPK VVAAVKAQLD NFSHTCVMVN PYESAVALAE QLNRIAPGGS
110 120 130 140 150
DKKAIFVTTG AEAVENCVKI ARAHTGRRGV IAFNGGFHGR TNLTMALTGK
160 170 180 190 200
ITPYKHQFGP FAGDIFHAPY PVAFHGVSVK DSLKAIEHLF KVDIAPCDVA
210 220 230 240 250
AIVVEPVQGE GGFYAAPPEF LQALRALCDQ HGIVLVMDEI QTGFGRTGKM
260 270 280 290 300
FSCEHAGVEP DLMTMAKGIA GGFPLAAVVG KSEIMDAPLP GGLGGTYGGS
310 320 330 340 350
PVGCVAALAV LEVMQEEQLV ERAVKIGDSF NQALSALKEQ YPQLIGEVRN
360 370 380 390 400
QGAMIAMELV IDGDIEQPNT ALTQAIIANA AAHGLVLLAC GFYGNVIRFL
410 420
PALTISDEIM AEGLAKFKTL FESLVD
Length:426
Mass (Da):45,163
Last modified:April 17, 2007 - v1
Checksum:i7900242144C3AFD2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000606 Genomic DNA. Translation: ABO25038.1.
RefSeqiYP_001095297.1. NC_009092.1.

Genome annotation databases

EnsemblBacteriaiABO25038; ABO25038; Shew_3172.
KEGGislo:Shew_3172.
PATRICi23518259. VBISheLoi132094_3169.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000606 Genomic DNA. Translation: ABO25038.1.
RefSeqiYP_001095297.1. NC_009092.1.

3D structure databases

ProteinModelPortaliA3QHU0.
SMRiA3QHU0. Positions 2-424.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi323850.Shew_3172.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO25038; ABO25038; Shew_3172.
KEGGislo:Shew_3172.
PATRICi23518259. VBISheLoi132094_3169.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiYHAQYPN.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciSLOI323850:GHQJ-3277-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1088 / PV-4Imported.

Entry informationi

Entry nameiA3QHU0_SHELP
AccessioniPrimary (citable) accession number: A3QHU0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: April 1, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.