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A3QG03 (A3QG03_SHELP) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Shew_2535 EMBL ABO24401.1
OrganismShewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP] EMBL ABO24401.1
Taxonomic identifier323850 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length546 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A3QG03 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: 26DCF164EB700BCE

FASTA54660,147
        10         20         30         40         50         60 
MTSKQTRQAT ASEEALMRIF TLPEAPNSTL GKIEKNLSEN LMGFLKESIV AVEKPLTEIE 

        70         80         90        100        110        120 
KDFQAYQIPT APSFVSDYAE QMMQTLIAHS VHTSAPSFIG HMTSALPYFV LPLSKMMVGL 

       130        140        150        160        170        180 
NQNLVKIETS KAFTPLERQV LGMMHHMVYG QTEEFYQSWM HSASHSLGAF CSGGTVANIT 

       190        200        210        220        230        240 
ALWIARNRLL KPDGDFKGVA QSGLMRALRH YGYDDLAILV STRGHYSLGK AADLLGIGRD 

       250        260        270        280        290        300 
NIISVPCASD NKVDVAKMRE AAEQLAEQNI KVMAIVGVAG TTETGNIDPL DELANLAEQL 

       310        320        330        340        350        360 
GCHFHVDAAW GGASLLSSKY RHLLAGIERA DSVTIDAHKQ MYVPMGAGMV LFKDPEFANA 

       370        380        390        400        410        420 
IKHHAEYILR KGSKDLGSQT LEGSRPGMAM LVHACLQIIG RDGYEILINN SLEKARYFGE 

       430        440        450        460        470        480 
LIAAQDDFQL VSRPELCLLT YRYVPAKVQA QLNEAVAAGD AARVSEINAL LDGLTKFIQK 

       490        500        510        520        530        540 
RQREQGKSFV SRTRIIPANN LEQTSVVFRV VLANPLTSNE ILQQVLDEQR DIAKLDDRFL 


PKLLAL 

« Hide

References

[1]"Complete sequence of Shewanella loihica PV-4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G., Fredrickson J., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1088 / PV-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000606 Genomic DNA. Translation: ABO24401.1.
RefSeqYP_001094660.1. NC_009092.1.

3D structure databases

ProteinModelPortalA3QG03.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323850.Shew_2535.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABO24401; ABO24401; Shew_2535.
GeneID4921240.
KEGGslo:Shew_2535.
PATRIC23516961. VBISheLoi132094_2535.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAGMMHNLV.
OrthoDBEOG6MSRZP.

Enzyme and pathway databases

BioCycSLOI323850:GHQJ-2624-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA3QG03_SHELP
AccessionPrimary (citable) accession number: A3QG03
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)