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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Shew_2535

Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotation
LigandPyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSLOI323850:G1G8D-2673-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Shew_2535Imported
OrganismiShewanella loihica (strain ATCC BAA-1088 / PV-4)Imported
Taxonomic identifieri323850 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000001558 Componenti: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei339N6-(pyridoxal phosphate)lysineUniRule annotation1

Interactioni

Protein-protein interaction databases

STRINGi323850.Shew_2535

Structurei

3D structure databases

ProteinModelPortaliA3QG03
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DY8 Bacteria
COG0076 LUCA
HOGENOMiHOG000282553
KOiK01580
OMAiFHKHFFQ
OrthoDBiPOG091H05DC

Family and domain databases

Gene3Di3.40.640.10, 1 hit
InterProiView protein in InterPro
IPR022517 Asp_decarboxylase_pyridox
IPR002129 PyrdxlP-dep_de-COase
IPR015424 PyrdxlP-dep_Trfase
IPR015421 PyrdxlP-dep_Trfase_major
PfamiView protein in Pfam
PF00282 Pyridoxal_deC, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit
TIGRFAMsiTIGR03799 NOD_PanD_pyr, 1 hit

Sequencei

Sequence statusi: Complete.

A3QG03-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSKQTRQAT ASEEALMRIF TLPEAPNSTL GKIEKNLSEN LMGFLKESIV
60 70 80 90 100
AVEKPLTEIE KDFQAYQIPT APSFVSDYAE QMMQTLIAHS VHTSAPSFIG
110 120 130 140 150
HMTSALPYFV LPLSKMMVGL NQNLVKIETS KAFTPLERQV LGMMHHMVYG
160 170 180 190 200
QTEEFYQSWM HSASHSLGAF CSGGTVANIT ALWIARNRLL KPDGDFKGVA
210 220 230 240 250
QSGLMRALRH YGYDDLAILV STRGHYSLGK AADLLGIGRD NIISVPCASD
260 270 280 290 300
NKVDVAKMRE AAEQLAEQNI KVMAIVGVAG TTETGNIDPL DELANLAEQL
310 320 330 340 350
GCHFHVDAAW GGASLLSSKY RHLLAGIERA DSVTIDAHKQ MYVPMGAGMV
360 370 380 390 400
LFKDPEFANA IKHHAEYILR KGSKDLGSQT LEGSRPGMAM LVHACLQIIG
410 420 430 440 450
RDGYEILINN SLEKARYFGE LIAAQDDFQL VSRPELCLLT YRYVPAKVQA
460 470 480 490 500
QLNEAVAAGD AARVSEINAL LDGLTKFIQK RQREQGKSFV SRTRIIPANN
510 520 530 540
LEQTSVVFRV VLANPLTSNE ILQQVLDEQR DIAKLDDRFL PKLLAL
Length:546
Mass (Da):60,147
Last modified:April 3, 2007 - v1
Checksum:i26DCF164EB700BCE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000606 Genomic DNA Translation: ABO24401.1
RefSeqiWP_011866332.1, NC_009092.1

Genome annotation databases

EnsemblBacteriaiABO24401; ABO24401; Shew_2535
KEGGislo:Shew_2535

Similar proteinsi

Entry informationi

Entry nameiA3QG03_SHELP
AccessioniPrimary (citable) accession number: A3QG03
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: March 28, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health