A3QFH9 (A3QFH9_SHELP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Proline racemase EMBL ABO24227.1

Gene names

Ordered Locus Names:

Shew_2361

Organism

Shewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP] EMBL ABO24227.1

Taxonomic identifier

323850 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella loihica

Protein attributes

Sequence length	346 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	proline racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3QFH9 [UniParc]. Last modified April 17, 2007. Version 1. Checksum: B96537BDF54E9C8C	FASTA	346	37,611
	10 20 30 40 50 60 MRLLDLSPSF LDACTRFKTL DAHTEGEPLR ILLEGYPEIP GDTILAKRRY LTAHLDQYRK 70 80 90 100 110 120 LLMHEPRGHA DMYGAIITAP ITTGADFGVL FLHNEGYSSM CGHGILALVT VAVETGTLAL 130 140 150 160 170 180 GDTPREIKID APAGLIHAKA YRDETGELKV SFRNVPSWAE ALDCRVTVEG IGEVAYDIGF 190 200 210 220 230 240 GGAYYAYVDA DGLGLSCAPE NVAQLIDWGR RIKHAVMAQH PLAHPLEADL GFLYGTIFTS 250 260 270 280 290 300 SKTSSNDAHS RHVCVFADGE VDRSPTGTGV AGRIALLHAR GEVALGERLR IESIVDGAMQ 310 320 330 340 VCALDNADFY GKAAVIPEVS GRAFITGRHE FILDPKDQFQ QGFMLR

References

[1]

"Complete sequence of Shewanella loihica PV-4." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G., Fredrickson J., Tiedje J., Richardson P. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1088 / PV-4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000606 Genomic DNA. Translation: ABO24227.1.
RefSeq	YP_001094486.1. NC_009092.1.
3D structure databases
ProteinModelPortal	A3QFH9.
ModBase	Search...
Protein-protein interaction databases
STRING	323850.Shew_2361.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABO24227; ABO24227; Shew_2361.
GeneID	4921733.
KEGG	slo:Shew_2361.
PATRIC	23516605. VBISheLoi132094_2360.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3938.
HOGENOM	HOG000084336.
KO	K01777.
OMA	LERRAYC.
ProtClustDB	CLSK962337.
Enzyme and pathway databases
BioCyc	SLOI323850:GHQJ-2485-MONOMER.
Family and domain databases
InterPro	IPR008794. Pro_racemase. [Graphical view]
Pfam	PF05544. Pro_racemase. 1 hit. [Graphical view]
PIRSF	PIRSF029792. Pro_racemase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3QFH9_SHELP

Accession

Primary (citable) accession number: A3QFH9

Entry history

Integrated into UniProtKB/TrEMBL:	April 17, 2007
Last sequence update:	April 17, 2007
Last modified:	May 1, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)