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A3QF86 (A3QF86_SHELP) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL ABO24134.1
Gene names
Ordered Locus Names:Shew_2268
OrganismShewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP] EMBL ABO24134.1
Taxonomic identifier323850 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length365 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionnucleotide binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A3QF86 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: D9AB582C221F57F7

FASTA36539,221
        10         20         30         40         50         60 
MSHHIEDLLN AWSAAPQDDW VLAVVTHVEG SAYRKVGAMM LIHGMGKSVG LVSGGCLEAD 

        70         80         90        100        110        120 
LRRRAQKVIQ TGQAASVCYD ATDEADASYQ LGCGGLVHLM LLPLCAANHY LHFQALKAAL 

       130        140        150        160        170        180 
ASQGRCHYQL MLTDESLSPG SLGAKVWTSQ QALDDAKAGW QLSDFPRPGI LQGQSMQGET 

       190        200        210        220        230        240 
VRGQSLQDES VQGESASLVV PLREHHRIAI FGGGLDAQPV CQIAQQLGWR VDVVDRRTSY 

       250        260        270        280        290        300 
AREYDFVGAN IIKLPVSELP KNFWTRLDGA IVMQHNLELD AKALAAIHQH AKQLSYLALL 

       310        320        330        340        350        360 
GPGHRRDRVL ALAGLEVASF GAYFSAPAGL ALGGELPSSI ALSILSECHG VLHGAKRVAL 


KEVMA

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References

[1]"Complete sequence of Shewanella loihica PV-4."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G., Fredrickson J., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1088 / PV-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000606 Genomic DNA. Translation: ABO24134.1.
RefSeqYP_001094393.1. NC_009092.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA3QF86.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4922623.
GenomeReviewsGene locus Shew_2268 in contig CP000606_GR.
KEGGslo:Shew_2268.
NMPDRfig|323850.3.peg.1619.
PATRIC23516409. VBISheLoi132094_2267.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1975.
HOGENOMHBG677650.
OMASILSECH.
ProtClustDBCLSK906971.

Enzyme and pathway databases

BioCycSLOI323850:SHEW_2268-MONOMER.

Family and domain databases

InterProIPR016040. NAD(P)-bd_dom.
IPR003777. XdhC_CoxI.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PfamPF02625. XdhC_CoxI. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3QF86_SHELP
AccessionPrimary (citable) accession number: A3QF86
Entry history
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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