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A3QEM1 (A3QEM1_SHELP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Peptidyl-dipeptidase A EMBL ABO23919.1
EC=3.4.15.1 EMBL ABO23919.1
Gene names
Ordered Locus Names:Shew_2053
OrganismShewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP] EMBL ABO23919.1
Taxonomic identifier323850 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella ›

Protein attributes

Sequence length634 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionCarboxypeptidase EMBL ABO23919.1
Hydrolase
Protease
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processproteolysis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncarboxypeptidase activity

Inferred from electronic annotation. Source: UniProtKB-KW

metallopeptidase activity

Inferred from electronic annotation. Source: InterPro

peptidyl-dipeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A3QEM1 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: 78BC8BEC0EB4F051

FASTA63470,946
        10         20         30         40         50         60 
MKPICAKLTP VAVVIALSLG IGGCNDDNNA NTESKATAES KAQQAAGQDG LKQQTSEQDK 

        70         80         90        100        110        120 
LAEAKQFISN AESQLADLSI EQNRAEWIYS NFITEDTATL AASVGERQTA LSVQLATQAA 

       130        140        150        160        170        180 
NYSQLPLDEV NTRKLNILRS ALVLPAPLDP KKNAELANIS AELNGLYGKG KYCLADGRCL 

       190        200        210        220        230        240 
TQPELSGIMA SSRDPKELEE IWKGWREIAK PMRPLFEREV ELANEGAKDL GYANLSELWR 

       250        260        270        280        290        300 
SQYDMQPDAF SAELDRLWGQ VEPLYESLHC YVRGELNEKY GDEVAPNKGP IPAHLLGNMW 

       310        320        330        340        350        360 
AQQWGNVYDM VAPQDADPGY DVTELLAKQG YDEHQMVKQA EGFFTSLGFD ALPETFWSRS 

       370        380        390        400        410        420 
LFLQPKDRDV VCHASAWDLN NLDDIRIKMC IQKTAEDFTV IHHELGHNFY QRAYKEQPFI 

       430        440        450        460        470        480 
FKNSANDGFH EAIGDTVALS ITPNYLKQIG LLQEVPDASK DIGLLLRQAL DKVAFLPFGL 

       490        500        510        520        530        540 
MIDQWRWKVF SGEITPAQYN QAWWELREKY QGVKAPIARS EADFDPGAKY HVPGNVPYTR 

       550        560        570        580        590        600 
YFLAHILQFQ FHKALCDIAG DKGPVHRCSI YGNKDAGAKL NAMLEMGQSK PWPEALEVVT 

       610        620        630 
GSQNMDASAV LDYFAPLKVW LDKQNKQANR QCGW

« Hide

References

[1]"Complete sequence of Shewanella loihica PV-4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G., Fredrickson J., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1088 / PV-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000606 Genomic DNA. Translation: ABO23919.1.
RefSeqYP_001094178.1. NC_009092.1.

3D structure databases

ProteinModelPortalA3QEM1.
ModBaseSearch...

Protein-protein interaction databases

STRING323850.Shew_2053.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABO23919; ABO23919; Shew_2053.
GeneID4923737.
KEGGslo:Shew_2053.
PATRIC23515957. VBISheLoi132094_2051.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG71044.
HOGENOMHOG000292210.
KOK01283.
OMADDIRIKM.
ProtClustDBCLSK903437.

Enzyme and pathway databases

BioCycSLOI323850:GHQJ-2177-MONOMER.

Family and domain databases

InterProIPR001548. Peptidase_M2.
[Graphical view]
PANTHERPTHR10514. PTHR10514. 1 hit.
PfamPF01401. Peptidase_M2. 1 hit.
[Graphical view]
PRINTSPR00791. PEPDIPTASEA.
ProtoNetSearch...

Entry information

Entry nameA3QEM1_SHELP
AccessionPrimary (citable) accession number: A3QEM1
Entry history
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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