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A3QE41 (A3QE41_SHELP) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glucan 1,4-alpha-glucosidase EMBL ABO23739.1
EC=3.2.1.3 EMBL ABO23739.1
Gene names
Ordered Locus Names:Shew_1873
OrganismShewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP] EMBL ABO23739.1
Taxonomic identifier323850 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length833 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3030 Potential EMBL ABO23739.1
Chain31 – 833803 Potential EMBL ABO23739.1
PRO_5000229190

Sequences

Sequence LengthMass (Da)Tools
A3QE41 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: D64697D39F31042E

FASTA83389,831
        10         20         30         40         50         60 
MTSKPVPFTR TLIALSLGAL LSACGGAKSD IDAAPAPSAS VSETISVAPG APGASPTWAF 

        70         80         90        100        110        120 
SGKTGIGTSF EPYVTNAQGA DQYLSSQANP VSRVWFSLAQ GILTETMYGL IHNAQLKEAQ 

       130        140        150        160        170        180 
FIISGNGFVD TEKHNTVTSI DYLHKDEAGR PLSLAYKVIN KDIEGKYQIE KHFFTDPDRD 

       190        200        210        220        230        240 
SLVMQVFFTA FEPGITPYLY VNPHIDNSGA NDIASVSQDG NSLFAYTGDK DSSVLTVRGD 

       250        260        270        280        290        300 
IPFTASSVGF VGESDGLTDL KANGELNWRY ASTSADKQSL GNVAMTAALP TLEVGDANRP 

       310        320        330        340        350        360 
SLRTTLVFGF GADKASSEQN AKDTLKDGYN KVLAAYNGEG DAIGWQDYLH SLSSLNAMTA 

       370        380        390        400        410        420 
NTADEGKLLY TSAMVLKAQE DKTHAGALIA SLSNPWGDSV SAVTGSTGYK AVWPRDFYQC 

       430        440        450        460        470        480 
AMAFLAMGDT QTPKVAFEYL KKVQVTAATP GYSGVPGWFL QKTHVDGQIE WVGVQLDQTA 

       490        500        510        520        530        540 
MPIMLGWKLW QAGVLSDNEI ASWYQTMLKP AADFLISGGE VNLDWNYTQI TPLKTQQERW 

       550        560        570        580        590        600 
EEQQGYSPST AAAVIAGLIT ASDIAKQAGD LNSSEKYLAS AKSMAEKLDS LVVTQQGLLS 

       610        620        630        640        650        660 
AEDGTKAPYY LRLAPNGTPD SADKLADNNG RAGLDQREVL DGGFLELVRY GVKSANDKTI 

       670        680        690        700        710        720 
NDTLKLIDNT ALEDNLRVRY EFTAKDGSTF PGFRRYGNDG YGEDTATGAN YAESGSNTPG 

       730        740        750        760        770        780 
QRGRVWPFFT GERAHFELAK AIADGTLNDA SKAQLVQTYV KGMEAFANEG LMLPEQVWDG 

       790        800        810        820        830 
VGDKTRFNYQ LGQGTNSATP LAWTHAEYVK MVRSITEAKV WDHYEDVAKA LNN

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References

[1]"Complete sequence of Shewanella loihica PV-4."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G., Fredrickson J., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1088 / PV-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000606 Genomic DNA. Translation: ABO23739.1.
RefSeqYP_001093998.1. NC_009092.1.

3D structure databases

ProteinModelPortalA3QE41.
ModBaseSearch...

Protein-protein interaction databases

STRINGA3QE41.

Protein family/group databases

CAZyGH15. Glycoside Hydrolase Family 15.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4924094.
GenomeReviewsGene locus Shew_1873 in contig CP000606_GR.
KEGGslo:Shew_1873.
PATRIC23515583. VBISheLoi132094_1871.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3387.
HOGENOMHBG290978.
OMARWEENAG.
ProtClustDBCLSK890895.

Enzyme and pathway databases

BioCycSLOI323850:SHEW_1873-MONOMER.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR006425. Glucoamylase_bac.
IPR015220. Glucodextran_N.
IPR011013. Glyco_hydro-type_carb-bd.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR011613. Glyco_hydro_15.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
KOK01178.
PfamPF09137. Glucodextran_N. 1 hit.
PF00723. Glyco_hydro_15. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF48208. Glyco_trans_6hp. 1 hit.
TIGRFAMsTIGR01535. Glucan_glucosid. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA3QE41_SHELP
AccessionPrimary (citable) accession number: A3QE41
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: January 25, 2012
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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