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A3QC39 (A3QC39_SHELP) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
4-alpha-glucanotransferase EMBL ABO23037.1
EC=2.4.1.25 EMBL ABO23037.1
Gene names
Ordered Locus Names:Shew_1167
OrganismShewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP] EMBL ABO23037.1
Taxonomic identifier323850 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length745 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A3QC39 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: CB6422D996FEB145

FASTA74583,579
        10         20         30         40         50         60 
MGLEKLLYLQ GVGASYSDYS GRLVHHSQAE RLGLLACLLA NCTQPKFHLD DLSPDGFVAA 

        70         80         90        100        110        120 
NGEAIEERNF DLDVAPWQRP LATFQFACLT EPSFILSLPA EMQPDLRVRI LTEGGTQLEM 

       130        140        150        160        170        180 
SIPFAALERV GDYYCEPHLY YRYRVSIAPY LTQGQSLPMG YHKLSVGFCK GTLDGKSKLN 

       190        200        210        220        230        240 
TVAIDWQTEG HHGTWLLAPP KAKQLRETDK PWGVSIALYS LRSDSQWGIG DFGDLGALIA 

       250        260        270        280        290        300 
WLGGYGCDFI QLNPLHALGD SFNLEEAYIS PYSPSDRRRL NPLYIHIESV PEANEIAPLL 

       310        320        330        340        350        360 
QTLALDRERL NRDNWLDYPK LTQLKYRLFV ALYQVFSRDV LGSGGPREQA FMQFVAQEGE 

       370        380        390        400        410        420 
ALSSFCQLEA DKAQAQGEQM AADPQLHSYL QFVAHEQLIA CQHQALAAGM SIGLIGDMAV 

       430        440        450        460        470        480 
GVRGDGAEVH HNRDAYCQQA SIGAPPDDFA PKGQNWGLTP PDPIAMAQSG FSHFIALVRS 

       490        500        510        520        530        540 
NMRYYGALRL DHVMALLRLW WWPSEPQEAP GAYVYYPIDT LLAIVRLESM RSNCVVIGED 

       550        560        570        580        590        600 
LGIVPDEVRA KLSDGGIYAN ELFYFCKQGE AFKSPQDHRA DSLMMLANHD VPTLLAWWSQ 

       610        620        630        640        650        660 
SDLHLKRQLE LLESDQALEQ ALERRDGERQ QLLAWLEANG ETASLEEDYL LLLSAWVTVA 

       670        680        690        700        710        720 
ARSHSRLFSV QLADLCCERH GVNIPGTWQE YANWQRRLPY SLTSLRQSPS IKRLLRSIVE 

       730        740 
GRSSAEASEQ FCRAGEHLRQ PVFSR

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References

[1]"Complete sequence of Shewanella loihica PV-4."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G., Fredrickson J., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1088 / PV-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000606 Genomic DNA. Translation: ABO23037.1.
RefSeqYP_001093296.1. NC_009092.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA3QC39.

Protein family/group databases

CAZyGH77. Glycoside Hydrolase Family 77.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4921040.
GenomeReviewsGene locus Shew_1167 in contig CP000606_GR.
KEGGslo:Shew_1167.
NMPDRfig|323850.3.peg.2850.
PATRIC23514113. VBISheLoi132094_1172.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1640.
HOGENOMHBG686276.
PhylomeDBA3QC39.

Enzyme and pathway databases

BioCycSLOI323850:SHEW_1167-MONOMER.

Family and domain databases

InterProIPR003385. Glyco_hydro_77.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
KOK00705.
PfamPF02446. Glyco_hydro_77. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
TIGRFAMsTIGR00217. MalQ. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA3QC39_SHELP
AccessionPrimary (citable) accession number: A3QC39
Entry history
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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