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A3QB56 (A3QB56_SHELP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Shew_0832
OrganismShewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP] EMBL ABO22704.1
Taxonomic identifier323850 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length590 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
A3QB56 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: BC7447BA2285A9C3

FASTA59064,756
        10         20         30         40         50         60 
MKTNYSRRDF LAMSAKGVGA AVVSYGLMGC SSSDDDKQET APKVQFLHGI ASGDPTPSAV 

        70         80         90        100        110        120 
ILWTRVTPDT DGDVKVGWEI ASDANFTQMI SNGETTTNAD RDYTVKVDAI GLDSGTAYYY 

       130        140        150        160        170        180 
RFMSGEQVSS VGMTKTLPEG AVEQVKLAVM SCANFPAGYF NVYELAGQQE GLDAVVHLGD 

       190        200        210        220        230        240 
YIYEYGRGGY ASEHAAELGR EVLPAGELFT LSDYRTRYGQ YRSDESLQTL HAKVPFITVW 

       250        260        270        280        290        300 
DDHEVANDTW SGGAENHNEG EGDFEARKMG ALQAYFEWLP IRPWREGNHE EIYRSFSFGD 

       310        320        330        340        350        360 
LVDLHMLDTR VLARDKQLDY ADYVDATTGA MDSARFMADV TSTERTLLGA EQLQWLQASL 

       370        380        390        400        410        420 
LGATGKWQVL GQQILMGTMM LPAAIAMQKL SVYEYAELGA LAQLAARAAA NDPTLTPQEY 

       430        440        450        460        470        480 
SFLIGNQYKL TPEVMALLQL PSIPYNLDAW DGYAYEREVI LATAKQKGAN LVVIAGDTHN 

       490        500        510        520        530        540 
AWANELKDSH GDLVGVEYAT SSVSSPGLEY YLGIPADQQS VTEAGVVDLV DGLKYTNLRD 

       550        560        570        580        590 
RGFMVLTFTS EAVRSDWHFV DTILDSEFSE ATEKHYAAMT MAGEPKITAA 

« Hide

References

[1]"Complete sequence of Shewanella loihica PV-4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G., Fredrickson J., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1088 / PV-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000606 Genomic DNA. Translation: ABO22704.1.
RefSeqYP_001092963.1. NC_009092.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING323850.Shew_0832.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABO22704; ABO22704; Shew_0832.
GeneID4920633.
KEGGslo:Shew_0832.
PATRIC23513433. VBISheLoi132094_0835.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3540.
HOGENOMHOG000240658.
KOK01113.
OMAADYMDAS.
ProtClustDBCLSK905942.

Enzyme and pathway databases

BioCycSLOI323850:GHQJ-956-MONOMER.

Family and domain databases

InterProIPR018946. Alk_phosphatase_PhoD-like.
IPR006311. TAT_signal.
[Graphical view]
PfamPF09423. PhoD. 1 hit.
[Graphical view]
PROSITEPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3QB56_SHELP
AccessionPrimary (citable) accession number: A3QB56
Entry history
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: May 1, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)