Putative uncharacterized protein - Shewanella loihica (strain ATCC BAA-1088 / PV-4)

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A3QB43 (A3QB43_SHELP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 35. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ABO22691.1

Gene names

Ordered Locus Names:

Shew_0819

Organism

Shewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP] EMBL ABO22691.1

Taxonomic identifier

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella ›

Protein attributes

Sequence length	124 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 3DCX Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence

Length

Mass (Da)

Tools

A3QB43 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: DCD2C48F1D68C44A
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124

13,741

        10         20         30         40         50         60 
MGLLDALMGN AAEVNLDELA QELGPIMGDN EQLALAYRVI RDMFVFTNKR LILIDKQGVT 

        70         80         90        100        110        120 
GKKVSYHSVP YKAITHFEVE TAGTFDMDAE LKLWISGQKD PLVKELKKGT DVVGIQKTIA 


NFSL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of Shewanella loihica PV-4." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. Richardson P. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1088 / PV-4.
[2]	"Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain." Xu Q., Bateman A., Finn R.D., Abdubek P., Astakhova T., Axelrod H.L., Bakolitsa C., Carlton D., Chen C., Chiu H.J., Chiu M., Clayton T., Das D., Deller M.C., Duan L., Ellrott K., Ernst D., Farr C.L. Wilson I.A. J. Mol. Biol. 396:31-46(2010) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 9-124.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP000606 Genomic DNA. Translation: ABO22691.1.

RefSeq

YP_001092950.1. NC_009092.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3DCX	X-ray	2.00	A/B/C/D/E	9-124	[»]

ProteinModelPortal

ModBase

Protein-protein interaction databases

STRING

323850.Shew_0819.

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

ABO22691; ABO22691; Shew_0819.

GeneID

KEGG

PATRIC

23513407. VBISheLoi132094_0822.

Organism-specific databases

CMR

Phylogenomic databases

eggNOG

HOGENOM

OMA

ProtClustDB

Enzyme and pathway databases

BioCyc

SLOI323850:GHQJ-943-MONOMER.

Family and domain databases

Gene3D

2.30.29.50. 1 hit.

InterPro

IPR023363. BPHL_dom.
IPR012544. DUF1696.
[Graphical view]

Pfam

PF08000. DUF1696. 1 hit.
[Graphical view]

ProtoNet

Other

EvolutionaryTrace

Entry information

Entry name

A3QB43_SHELP

Accession

Primary (citable) accession number: A3QB43

Entry history

Integrated into UniProtKB/TrEMBL:	April 17, 2007
Last sequence update:	April 17, 2007
Last modified:	May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info