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Protein
Submitted name:

FAD-dependent pyridine nucleotide-disulphide oxidoreductase

Gene

Shew_0729

Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei7FADCombined sources1
Binding sitei12FAD; via amide nitrogenCombined sources1
Binding sitei15Coenzyme ACombined sources1
Binding sitei42FADCombined sources1
Binding sitei81FAD; via amide nitrogen and carbonyl oxygenCombined sources1
Binding sitei112FADCombined sources1
Binding sitei134FADCombined sources1
Binding sitei303FADCombined sources1
Binding sitei325Coenzyme ACombined sources1
Binding sitei329Coenzyme ACombined sources1
Binding sitei446Coenzyme ACombined sources1
Binding sitei446FADCombined sources1
Binding sitei454Coenzyme ACombined sources1
Binding sitei459Coenzyme ACombined sources1
Binding sitei466Coenzyme ACombined sources1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi33 – 34FADCombined sources2
Nucleotide bindingi319 – 321FADCombined sources3

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

FADCombined sources, Flavoprotein, Nucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciSLOI323850:GHQJ-751-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
FAD-dependent pyridine nucleotide-disulphide oxidoreductaseImported
Gene namesi
Ordered Locus Names:Shew_0729Imported
OrganismiShewanella loihica (strain ATCC BAA-1088 / PV-4)Imported
Taxonomic identifieri323850 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000001558 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi323850.Shew_0729.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3NT6X-ray2.00A/B1-566[»]
3NTAX-ray2.01A/B1-566[»]
3NTDX-ray1.99A/B1-565[»]
4OCGX-ray2.75A/B1-566[»]
ProteinModelPortaliA3QAV3.
SMRiA3QAV3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiA3QAV3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini483 – 566RhodaneseInterPro annotationAdd BLAST84

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni19 – 22Coenzyme A bindingCombined sources4
Regioni39 – 43Coenzyme A bindingCombined sources5
Regioni533 – 534Coenzyme A bindingCombined sources2

Phylogenomic databases

eggNOGiENOG4108DNI. Bacteria.
COG0446. LUCA.
COG0607. LUCA.
HOGENOMiHOG000276710.
OMAiMMEAFHQ.
OrthoDBiPOG091H02KF.

Family and domain databases

Gene3Di3.30.390.30. 1 hit.
3.40.250.10. 1 hit.
3.50.50.60. 2 hits.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR016156. FAD/NAD-linked_Rdtase_dimer.
IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
IPR001763. Rhodanese-like_dom.
[Graphical view]
PfamiPF07992. Pyr_redox_2. 1 hit.
PF02852. Pyr_redox_dim. 1 hit.
PF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
SSF52821. SSF52821. 1 hit.
SSF55424. SSF55424. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A3QAV3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKILIIGGV AGGASAAARA RRLSETAEII MFERGEYVSF ANCGLPYHIS
60 70 80 90 100
GEIAQRSALV LQTPESFKAR FNVEVRVKHE VVAIDRAAKL VTVRRLLDGS
110 120 130 140 150
EYQESYDTLL LSPGAAPIVP PIPGVDNPLT HSLRNIPDMD RILQTIQMNN
160 170 180 190 200
VEHATVVGGG FIGLEMMESL HHLGIKTTLL ELADQVMTPV DREMAGFAHQ
210 220 230 240 250
AIRDQGVDLR LGTALSEVSY QVQTHVASDA AGEDTAHQHI KGHLSLTLSN
260 270 280 290 300
GELLETDLLI MAIGVRPETQ LARDAGLAIG ELGGIKVNAM MQTSDPAIYA
310 320 330 340 350
VGDAVEEQDF VTGQACLVPL AGPANRQGRM AADNMFGREE RYQGTQGTAI
360 370 380 390 400
CKVFDLAVGA TGKNEKQLKQ AGIAFEKVYV HTASHASYYP GAEVVSFKLL
410 420 430 440 450
FDPVKGTIFG AQAVGKDGID KRIDVMAVAQ RAGMTVEQLQ HLELSYAPPY
460 470 480 490 500
GSAKDVINQA AFVASNIIKG DATPIHFDQI DNLSEDQLLL DVRNPGELQN
510 520 530 540 550
GGLEGAVNIP VDELRDRMHE LPKDKEIIIF CQVGLRGNVA YRQLVNNGYR
560
ARNLIGGYRT YKFASV
Length:566
Mass (Da):61,286
Last modified:April 17, 2007 - v1
Checksum:i6653C9204C85CDE3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000606 Genomic DNA. Translation: ABO22601.1.
RefSeqiWP_011864535.1. NC_009092.1.

Genome annotation databases

EnsemblBacteriaiABO22601; ABO22601; Shew_0729.
KEGGislo:Shew_0729.
PATRICi23513225. VBISheLoi132094_0731.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000606 Genomic DNA. Translation: ABO22601.1.
RefSeqiWP_011864535.1. NC_009092.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3NT6X-ray2.00A/B1-566[»]
3NTAX-ray2.01A/B1-566[»]
3NTDX-ray1.99A/B1-565[»]
4OCGX-ray2.75A/B1-566[»]
ProteinModelPortaliA3QAV3.
SMRiA3QAV3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi323850.Shew_0729.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO22601; ABO22601; Shew_0729.
KEGGislo:Shew_0729.
PATRICi23513225. VBISheLoi132094_0731.

Phylogenomic databases

eggNOGiENOG4108DNI. Bacteria.
COG0446. LUCA.
COG0607. LUCA.
HOGENOMiHOG000276710.
OMAiMMEAFHQ.
OrthoDBiPOG091H02KF.

Enzyme and pathway databases

BioCyciSLOI323850:GHQJ-751-MONOMER.

Miscellaneous databases

EvolutionaryTraceiA3QAV3.

Family and domain databases

Gene3Di3.30.390.30. 1 hit.
3.40.250.10. 1 hit.
3.50.50.60. 2 hits.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR016156. FAD/NAD-linked_Rdtase_dimer.
IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
IPR001763. Rhodanese-like_dom.
[Graphical view]
PfamiPF07992. Pyr_redox_2. 1 hit.
PF02852. Pyr_redox_dim. 1 hit.
PF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
SSF52821. SSF52821. 1 hit.
SSF55424. SSF55424. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA3QAV3_SHELP
AccessioniPrimary (citable) accession number: A3QAV3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 17, 2007
Last sequence update: April 17, 2007
Last modified: November 2, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.