A3QA45 (CH10_SHELP) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
10 kDa chaperonin

Alternative name(s):
GroES protein
Protein Cpn10

Gene names

Name:	groS
Synonyms:	groES
Ordered Locus Names:	Shew_0471

Organism

Shewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP]

Taxonomic identifier

323850 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	96 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. HAMAP MF_00580
Subunit structure	Heptamer of 7 subunits arranged in a ring By similarity.
Subcellular location	Cytoplasm By similarity HAMAP MF_00580.
Sequence similarities	Belongs to the GroES chaperonin family.

Ontologies

Keywords
Cellular component	Cytoplasm
Molecular function	Chaperone
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein folding Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 96	96	10 kDa chaperonin HAMAP MF_00580		PRO_1000025363

Sequences

	Sequence		Length	Mass (Da)
	A3QA45 [UniParc]. Last modified April 17, 2007. Version 1. Checksum: 54800A18C7CF9DC4	FASTA	96	10,274
	10 20 30 40 50 60 MNIRPLHDRV IVKRSEVESK SAGGIVLTGS AAEQSTRGEV LAVGNGRILE NGTVQPLDVK 70 80 90 VGDIVIFNEG YGVKKEKIDG QEVLILSESD LMAVVE

References

[1]

"Complete sequence of Shewanella loihica PV-4." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G., Fredrickson J., Tiedje J., Richardson P. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1088 / PV-4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000606 Genomic DNA. Translation: ABO22343.1.
RefSeq	YP_001092602.1. NC_009092.1.
3D structure databases
ProteinModelPortal	A3QA45.
SMR	A3QA45. Positions 1-96.
ModBase	Search...
Protein-protein interaction databases
STRING	A3QA45.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4922411.
GenomeReviews	Gene locus Shew_0471 in contig CP000606_GR.
KEGG	slo:Shew_0471.
NMPDR	fig|323850.3.peg.3123.
PATRIC	23512713. VBISheLoi132094_0479.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0234.
HOGENOM	HBG703377.
OMA	YGVKVEK.
PhylomeDB	A3QA45.
ProtClustDB	PRK00364.
Enzyme and pathway databases
BioCyc	SLOI323850:SHEW_0471-MONOMER.
Family and domain databases
HAMAP	MF_00580. CH10. [Tree]
InterPro	IPR020818. Chaperonin_Cpn10. IPR018369. Chaprnonin_Cpn10_CS. IPR011032. GroES-like. [Graphical view]
Gene3D	G3DSA:2.30.33.40. Chaprnin_Cpn10. 1 hit.
KO	K04078.
PANTHER	PTHR10772. Chaprnin_Cpn10. 1 hit.
Pfam	PF00166. Cpn10. 1 hit. [Graphical view]
PRINTS	PR00297. CHAPERONIN10.
SMART	SM00883. Cpn10. 1 hit. [Graphical view]
SUPFAM	SSF50129. GroES_like. 1 hit.
PROSITE	PS00681. CHAPERONINS_CPN10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

CH10_SHELP

Accession

Primary (citable) accession number: A3QA45

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	April 17, 2007
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program