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A3Q9C4 (CAPP_SHELP) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase

Short name=PEPC
Short name=PEPCase
EC=4.1.1.31
Gene names
Name:ppc
Ordered Locus Names:Shew_0200
OrganismShewanella loihica (strain ATCC BAA-1088 / PV-4) [Complete proteome] [HAMAP]
Taxonomic identifier323850 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length878 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family.

Ontologies

Keywords
   Biological processCarbon dioxide fixation
   LigandMagnesium
   Molecular functionLyase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

oxaloacetate metabolic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

tricarboxylic acid cycle

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

phosphoenolpyruvate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 878878Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595
PRO_1000025587

Sites

Active site1381 By similarity
Active site5451 By similarity

Sequences

Sequence LengthMass (Da)Tools
A3Q9C4 [UniParc].

Last modified April 17, 2007. Version 1.
Checksum: 202CEAAE56830783

FASTA87898,940
        10         20         30         40         50         60 
MTDMYASLRS NVGTLGQILG DTIRTHMDEP FLDKIEQIRH LAKSSRQGND TAREQMLTLL 

        70         80         90        100        110        120 
AALPDEELVP FAKAFNQFLN LANIAEQFHT ISRNCDELVC VPDPVDQLLG RMLNGRIDQD 

       130        140        150        160        170        180 
KMLECLQTLD IDLVLTAHPT EISRRTLIQK YSAVVDCLAT MENPQLTERE KKQNHLRLRQ 

       190        200        210        220        230        240 
LIAQIWHTNE IRHERPTPVD EARWGLSTIE ASLWQAIPDF LRQLNEQVEE RTGKQLPSDI 

       250        260        270        280        290        300 
APIRFSSWMG GDRDGNPFVT AKVTQEVLDR NRHTAARLYL KDVVLLVNEL SMEEANEELL 

       310        320        330        340        350        360 
ALTDNSHEPY RVVLRELRQK LRDTIDYLNA RLEGHSPEVD LDSLIWHEDD LKQPLTLLYR 

       370        380        390        400        410        420 
SLTESGMSLI ANGLLLDMLR RLACFGIHML RLDIRQDAQR HSDVIAELTR YLGLGDFDHW 

       430        440        450        460        470        480 
DEHEKQAFLL RELSGKRPLI PHNWEPSAEV AEVISTVRLI ASQSPKALGS YVISMASQPS 

       490        500        510        520        530        540 
DVLTVLLLLK EAGCQHPMRV VPLFETLEDL NNAASCISAL FAIDWYRGYC KGSQEVMIGY 

       550        560        570        580        590        600 
SDSAKDAGVM AAAWAQYSAQ EKLVKVCNQA DIKLTLFHGR GGTIGRGGGP AHKAILSQPP 

       610        620        630        640        650        660 
GSVDGRIRVT EQGEMIRFKF GLPKLAVQSL ALYTSAVMEA TLLPPPEPKP EWREAMERLA 

       670        680        690        700        710        720 
SDSVTAYRAI VREEPDFVAY FRAATPEVEL GKLPLGSRPA KRRVDGGIES LRAIPWIFAW 

       730        740        750        760        770        780 
SQNRLMLPAW LGAGEALQQA ADRGELTLLR EMEQQWPFFE TRISMLEMVY AKAEPNLAKY 

       790        800        810        820        830        840 
YETCLVPQEL HHLGEALRSR MATGIKVVLE LTQSDALMSH TPWNRESVEL RNPYIDPLNF 

       850        860        870 
LQAELLARTR KEQAGSSNVE LALMLTIAGV AAGMRNTG 

« Hide

References

[1]"Complete sequence of Shewanella loihica PV-4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G., Fredrickson J., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1088 / PV-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000606 Genomic DNA. Translation: ABO22072.1.
RefSeqYP_001092331.1. NC_009092.1.

3D structure databases

ProteinModelPortalA3Q9C4.
SMRA3Q9C4. Positions 5-878.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323850.Shew_0200.

Proteomic databases

PRIDEA3Q9C4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABO22072; ABO22072; Shew_0200.
GeneID4922459.
KEGGslo:Shew_0200.
PATRIC23512147. VBISheLoi132094_0201.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238648.
KOK01595.
OMAAIPWVFG.
OrthoDBEOG6TJ7T8.
ProtClustDBPRK00009.

Enzyme and pathway databases

BioCycSLOI323850:GHQJ-212-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCAPP_SHELP
AccessionPrimary (citable) accession number: A3Q9C4
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: April 17, 2007
Last modified: February 19, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families