Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mjls_5320

Organism
Mycobacterium sp. (strain JLS)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP164757:GHV3-5368-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mjls_5320Imported
OrganismiMycobacterium sp. (strain JLS)Imported
Taxonomic identifieri164757 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000002152 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi164757.Mjls_5320.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3Q7F6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQLPVSPPIA PMLSKAVADI PLGASYEPKW DGFRSIVFRD GDEVELGSRN
60 70 80 90 100
ERPMTRYFPE LVEAARAELP ARCVIDGEIV IATADGLDFE ALQLRLHPAA
110 120 130 140 150
SRVRMLAEKT PASFIAFDLL ALGDTDYTSR PFVERRAELE RVLTGGHTFH
160 170 180 190 200
VTPATVDVDT ARRWFHEFEG AGLDGVIAKP LDGPYLPDKR VMFKVKHQRT
210 220 230 240 250
ADCVVAGYRL HKSGDDAIGS LLLGLYTDDG ELASVGVIGA FPMARRRALF
260 270 280 290 300
AELQPLVTTF DEHPWNWAAH ADPDVVRRYG GGSRWNAGKD LSFVPLRPER
310 320 330 340 350
VVEVRYDHME GRRFRHTAQF NRWRPDRDPR SCTYAQLEQP VTFRLGDIVP

GLG
Length:353
Mass (Da):39,518
Last modified:April 3, 2007 - v1
Checksum:iDA544A6B59E5DC1A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000580 Genomic DNA. Translation: ABO01084.1.
RefSeqiWP_011857336.1. NC_009077.1.
YP_001073574.1. NC_009077.1.

Genome annotation databases

EnsemblBacteriaiABO01084; ABO01084; Mjls_5320.
KEGGimjl:Mjls_5320.
PATRICi18096907. VBIMycSp51234_5357.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000580 Genomic DNA. Translation: ABO01084.1.
RefSeqiWP_011857336.1. NC_009077.1.
YP_001073574.1. NC_009077.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi164757.Mjls_5320.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO01084; ABO01084; Mjls_5320.
KEGGimjl:Mjls_5320.
PATRICi18096907. VBIMycSp51234_5357.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
OrthoDBiEOG63NMFT.

Enzyme and pathway databases

BioCyciMSP164757:GHV3-5368-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JLSImported.

Entry informationi

Entry nameiA3Q7F6_MYCSJ
AccessioniPrimary (citable) accession number: A3Q7F6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: April 1, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.