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A3Q7F6 (A3Q7F6_MYCSJ) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mjls_5320 EMBL ABO01084.1
OrganismMycobacterium sp. (strain JLS) [Complete proteome] [HAMAP] EMBL ABO01084.1
Taxonomic identifier164757 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABO01084.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A3Q7F6 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: DA544A6B59E5DC1A

FASTA35339,518
        10         20         30         40         50         60 
MQLPVSPPIA PMLSKAVADI PLGASYEPKW DGFRSIVFRD GDEVELGSRN ERPMTRYFPE 

        70         80         90        100        110        120 
LVEAARAELP ARCVIDGEIV IATADGLDFE ALQLRLHPAA SRVRMLAEKT PASFIAFDLL 

       130        140        150        160        170        180 
ALGDTDYTSR PFVERRAELE RVLTGGHTFH VTPATVDVDT ARRWFHEFEG AGLDGVIAKP 

       190        200        210        220        230        240 
LDGPYLPDKR VMFKVKHQRT ADCVVAGYRL HKSGDDAIGS LLLGLYTDDG ELASVGVIGA 

       250        260        270        280        290        300 
FPMARRRALF AELQPLVTTF DEHPWNWAAH ADPDVVRRYG GGSRWNAGKD LSFVPLRPER 

       310        320        330        340        350 
VVEVRYDHME GRRFRHTAQF NRWRPDRDPR SCTYAQLEQP VTFRLGDIVP GLG 

« Hide

References

[1]"Complete sequence of Mycobacterium sp. JLS."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Miller C.D., Anderson A.J., Sims R.C., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JLS EMBL ABO01084.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000580 Genomic DNA. Translation: ABO01084.1.
RefSeqYP_001073574.1. NC_009077.1.

3D structure databases

ProteinModelPortalA3Q7F6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING164757.Mjls_5320.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABO01084; ABO01084; Mjls_5320.
GeneID4881017.
KEGGmjl:Mjls_5320.
PATRIC18096907. VBIMycSp51234_5357.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222508.
KOK01971.
OrthoDBEOG63NMFT.
ProtClustDBPRK08224.

Enzyme and pathway databases

BioCycMSP164757:GHV3-5368-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3Q7F6_MYCSJ
AccessionPrimary (citable) accession number: A3Q7F6
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: April 16, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)