Skip Header

Contribute Send feedback
Read comments (?) or add your own

A3PXY4 (RS2_MYCSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S2
Gene names
Name:rpsB
Ordered Locus Names:Mjls_1974
OrganismMycobacterium sp. (strain JLS) [Complete proteome] [HAMAP]
Taxonomic identifier164757 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular componentsmall ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 28428430S ribosomal protein S2 HAMAP MF_00291_B
PRO_1000004000

Sequences

Sequence LengthMass (Da)Tools
A3PXY4 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: 5457DC9BBC01FAD4

FASTA28431,078
        10         20         30         40         50         60 
MAVVTMKQLL DSGTHFGHQT RRWNPKMKRF IFTDRNGIYI IDLQQTLTYI DKAYEFVKET 

        70         80         90        100        110        120 
VAHGGSIMFV GTKKQAQESI AEEATRVGMP YVNQRWLGGM LTNFSTVHKR LQRLKELEAM 

       130        140        150        160        170        180 
EQTGGFEGRT KKEILMLTRE KNKLERSLGG IRDMQKVPSA IWVVDTNKEH LAVAEARKLN 

       190        200        210        220        230        240 
IPIIAILDTN CDPDVVDYPI PGNDDAIRSA ALLTKVVASA VAEGLQARAG GGNGNKPEAE 

       250        260        270        280 
AAEPLAEWEQ ELLAGATASP TAAGAAPGTP EADIQTEPTA PQNP

« Hide

References

[1]"Complete sequence of Mycobacterium sp. JLS."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Miller C.D., Anderson A.J., Sims R.C., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JLS.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000580 Genomic DNA. Translation: ABN97761.1.
RefSeqYP_001070252.1. NC_009077.1.

3D structure databases

ProteinModelPortalA3PXY4.
SMRA3PXY4. Positions 9-225.
ModBaseSearch...

Protein-protein interaction databases

STRINGA3PXY4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBMYCT00000047790; EBMYCP00000046071; EBMYCG00000047785.
GeneID4877695.
GenomeReviewsGene locus Mjls_1974 in contig CP000580_GR.
KEGGmjl:Mjls_1974.
PATRIC18090070. VBIMycSp51234_1975.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0052.
GeneTreeEBGT00050000017722.
HOGENOMHBG736296.
OMAKQAQDSV.
PhylomeDBA3PXY4.
ProtClustDBPRK05299.

Enzyme and pathway databases

BioCycMSP164757:MJLS_1974-MONOMER.

Family and domain databases

HAMAPMF_00291_B. Ribosomal_S2_B.
[Tree]
InterProIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR018130. Ribosomal_S2_CS.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
KOK02967.
PANTHERPTHR12534. Ribosom_S2_bac. 1 hit.
PfamPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSPR00395. RIBOSOMALS2.
SUPFAMSSF52313. Ribosomal_S2. 1 hit.
TIGRFAMsTIGR01011. RpsB_bact. 1 hit.
PROSITEPS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS2_MYCSJ
AccessionPrimary (citable) accession number: A3PXY4
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: April 3, 2007
Last modified: January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents