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A3PS35 (A3PS35_RHOS1) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
2-dehydro-3-deoxyphosphooctonate aldolase HAMAP MF_00056
EC=2.5.1.55 HAMAP MF_00056
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase HAMAP MF_00056
KDO-8-phosphate synthase HAMAP MF_00056
Phospho-2-dehydro-3-deoxyoctonate aldolase HAMAP MF_00056
Gene names
Name:kdsA HAMAP MF_00056
Ordered Locus Names:Rsph17029_4073
Encoded onPlasmid pRSPH01 EMBL ABN79151.1
OrganismRhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) [Complete proteome] [HAMAP]
Taxonomic identifier349101 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter

Protein attributes

Sequence length278 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. HAMAP MF_00056 SAAS SAAS006269

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. HAMAP MF_00056 SAAS SAAS006269

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. HAMAP MF_00056 SAAS SAAS006269

Subcellular location

Cytoplasm By similarity HAMAP MF_00056 SAAS SAAS006269.

Sequence similarities

Belongs to the KdsA family. HAMAP MF_00056

Sequences

Sequence LengthMass (Da)Tools
A3PS35 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: BB3A967A8207AAEC

FASTA27829,363
        10         20         30         40         50         60 
MTETPTIVTI GDIAIGGGHP IALITGPCQL ESLDHARMMA ERIAEACAPT GTKFIFKASY 

        70         80         90        100        110        120 
DKANRSSLST ARGLGMEKGL EILGRIREEF GVPVLTDVHE PGHCATAAEV CDVLQIPAFL 

       130        140        150        160        170        180 
CRQTDLLLAA GETGRAVNVK KGQFLAPWDM KNVADKVAST GNRRILLCER GTSFGYNTLV 

       190        200        210        220        230        240 
TDFRGLPTMA ATGWPVVFDA THSVQQPGGL GGSSGGQREF APVLARAACA VGVSALFIET 

       250        260        270 
HEDPDRAPSD GPNMIPVDRM GRLIADLCAF DALAKSLA

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References

[1]"Complete sequence of plasmid pRSPH01 of Rhodobacter sphaeroides ATCC 17029."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P., Mackenzie C., Choudhary M., Donohue T.J., Kaplan S.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000579 Genomic DNA. Translation: ABN79151.1.
RefSeqYP_001041787.1. NC_009040.1.

3D structure databases

ProteinModelPortalA3PS35.
ModBaseSearch...

Protein-protein interaction databases

STRINGA3PS35.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4894991.
GenomeReviewsGene locus Rsph17029_4073 in contig CP000579_GR.
KEGGrsh:Rsph17029_4073.
PATRIC23167351. VBIRhoSph114483_0007.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2877.
HOGENOMHBG575990.
OMAITERGAM.
ProtClustDBPRK05198.

Enzyme and pathway databases

BioCycRSPH349101:RSPH17029_4073-MONOMER.

Family and domain databases

HAMAPMF_00056. KDO8P_synth.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01627.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA3PS35_RHOS1
AccessionPrimary (citable) accession number: A3PS35
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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