A3PMS0 (A3PMS0_RHOS1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Peptide deformylase RuleBase RU003335

Gene names

Ordered Locus Names:

Rsph17029_2534

Organism

Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) [Complete proteome] [HAMAP]

Taxonomic identifier

349101 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter

Protein attributes

Sequence length	167 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Formyl-L-methionyl peptide + H2O = formate + methionyl peptide. SAAS SAAS000181
Sequence similarities	Belongs to the polypeptide deformylase family. RuleBase RU003335

Ontologies

Keywords
Biological process	Protein biosynthesis SAAS SAAS000181
Ligand	Metal-binding SAAS SAAS000181
Molecular function	Hydrolase SAAS SAAS000181
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	iron ion binding Inferred from electronic annotation. Source: InterPro peptide deformylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3PMS0 [UniParc]. Last modified April 3, 2007. Version 1. Checksum: 9926029F20D05787	FASTA	167	18,713
	10 20 30 40 50 60 MIRPFVMYPD KRLKTVAAPV EAVTDEIRAI WTDMIETMDA MPGYGLAAPQ IGVMLRLAVV 70 80 90 100 110 120 DCSESRGKAI RLANPEILHA SGQFREHEEG SPNLPGASAV VSRPRAVTVR FLNEAGETEE 130 140 150 160 RDFVDIWATS VQHQIDHLDG RLYIDRLSPL KRKMVVAKSE KYLRRVG

References

[1]

"Complete sequence of chromosome 1 of Rhodobacter sphaeroides ATCC 17029." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P., Mackenzie C., Choudhary M., Donohue T.J., Kaplan S. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000577 Genomic DNA. Translation: ABN77636.1.
RefSeq	YP_001044408.1. NC_009049.1.
3D structure databases
ProteinModelPortal	A3PMS0.
ModBase	Search...
Protein-protein interaction databases
STRING	A3PMS0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4895431.
GenomeReviews	Gene locus Rsph17029_2534 in contig CP000577_GR.
KEGG	rsh:Rsph17029_2534.
PATRIC	23172953. VBIRhoSph114483_2767.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0242.
HOGENOM	HBG665227.
OMA	QHQIDHL.
ProtClustDB	CLSK934097.
Enzyme and pathway databases
BioCyc	RSPH349101:RSPH17029_2534-MONOMER.
Family and domain databases
HAMAP	MF_00163. Pep_deformylase. [Tree]
InterPro	IPR000181. Fmet_deformylase. IPR023635. Peptide_deformylase. [Graphical view]
Gene3D	G3DSA:3.90.45.10. Fmet_deformylase. 1 hit.
KO	K01462.
PANTHER	PTHR10458. Fmet_deformylase. 1 hit.
Pfam	PF01327. Pep_deformylase. 1 hit. [Graphical view]
PIRSF	PIRSF004749. Pep_def. 1 hit.
PRINTS	PR01576. PDEFORMYLASE.
SUPFAM	SSF56420. Fmet_deformylase. 1 hit.
TIGRFAMs	TIGR00079. Pept_deformyl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3PMS0_RHOS1

Accession

Primary (citable) accession number: A3PMS0

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	April 3, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)