A3PL43 (URED_RHOS1) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Urease accessory protein UreD

Gene names

Name:	ureD
Ordered Locus Names:	Rsph17029_1955

Organism

Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) [Complete proteome] [HAMAP]

Taxonomic identifier

349101 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter

Protein attributes

Sequence length	275 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter By similarity. HAMAP MF_01384
Subunit structure	UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel By similarity.
Subcellular location	Cytoplasm By similarity HAMAP MF_01384.
Sequence similarities	Belongs to the UreD family.

Ontologies

Keywords
Biological process	Nickel insertion
Cellular component	Cytoplasm
Molecular function	Chaperone
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	nickel cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 275	275	Urease accessory protein UreD HAMAP MF_01384		PRO_0000340507

Sequences

	Sequence		Length	Mass (Da)
	A3PL43 [UniParc]. Last modified April 3, 2007. Version 1. Checksum: F0D6F59E6F6BC452	FASTA	275	28,726
	10 20 30 40 50 60 MNALTPLSAR LERSDGHALV TLARSRGAVR LRDLAQRGSA KAFLPRVEGD VPEVVFLNTS 70 80 90 100 110 120 GGLTGGDRLS YRLELGAGCR ATATTQTAER AYAAGAGAAR VEVLHEVGRD GWLDWLPQET 130 140 150 160 170 180 ILFEGAALER ETQISLAPGA GCLMVESVVL GRAAMGETLS RLAFRDRRSI LRAGKPVLVE 190 200 210 220 230 240 PLALDDRALA AAGGAAMLGG ARALATLAMV GPGAEDALGP ARAALGEAGV EAAASAFDGK 250 260 270 LVLRLLAADG WPLRRQVARL LTVLRGRALP RVWQV

References

[1]

"Complete sequence of chromosome 1 of Rhodobacter sphaeroides ATCC 17029." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P., Mackenzie C., Choudhary M., Donohue T.J., Kaplan S. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17029 / ATH 2.4.9.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000577 Genomic DNA. Translation: ABN77059.1.
RefSeq	YP_001043831.1. NC_009049.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A3PL43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4895218.
GenomeReviews	Gene locus Rsph17029_1955 in contig CP000577_GR.
KEGG	rsh:Rsph17029_1955.
PATRIC	23171720. VBIRhoSph114483_2157.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0829.
HOGENOM	HBG711156.
OMA	QETILFD.
ProtClustDB	CLSK940836.
Enzyme and pathway databases
BioCyc	RSPH349101:RSPH17029_1955-MONOMER.
Family and domain databases
HAMAP	MF_01384. UreD. [Tree]
InterPro	IPR002669. UreD. [Graphical view]
KO	K03190.
Pfam	PF01774. UreD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

URED_RHOS1

Accession

Primary (citable) accession number: A3PL43

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 10, 2008
Last sequence update:	April 3, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program