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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Rsph17029_0848

Organism
Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciRSPH349101:GHC8-865-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Ordered Locus Names:Rsph17029_0848Imported
OrganismiRhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)Imported
Taxonomic identifieri349101 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
ProteomesiUP000002606: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi349101.Rsph17029_0848.

Structurei

3D structure databases

ProteinModelPortaliA3PHZ3.
SMRiA3PHZ3. Positions 3-424.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiGQRLTNT.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3PHZ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNADVSRRR TEAVSRGVGM QTQIYADRAL NAEIWDIEGR RYIDFAAGIA
60 70 80 90 100
VVNTGHCHPK VMAAVAEQMG RFTHTCHQVL PYENYIRLAE RLNAAAPGDF
110 120 130 140 150
AKKTVFVTTG AESVENAIKI ARIHTGRSAV VAFGGGFHGR TFMTMSLTGK
160 170 180 190 200
VEPYKKGFGT MMPEVYHVPF PQALHGISTE EAMAALARLF KADLDPGRVA
210 220 230 240 250
AIIFEPVQGE GGFYPAPPDL VRAIRQLCDA HGIVMIADEV QTGFARTGTL
260 270 280 290 300
FAMHGYDVAP DLVTMAKGLG GGLPIAAVTG RAEIMDAAHP GGLGGTYGGN
310 320 330 340 350
PLGIAAAHAV LDVIEEENLC ARATELGSRL KQKLAEIRAT APEIADIRGP
360 370 380 390 400
GFMVGAEFAD PGSKAPDAGF TNRVREEALK RGLILLTCGV HGNVIRFLAP
410 420
ITIPEPHFAE ALEILEASVA AARQG
Length:425
Mass (Da):45,203
Last modified:April 3, 2007 - v1
Checksum:iC58E9CDF92A792F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000577 Genomic DNA. Translation: ABN75959.1.
RefSeqiWP_011840643.1. NC_009049.1.
YP_001042731.1. NC_009049.1.

Genome annotation databases

EnsemblBacteriaiABN75959; ABN75959; Rsph17029_0848.
GeneIDi4896626.
KEGGirsh:Rsph17029_0848.
PATRICi23169382. VBIRhoSph114483_1003.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000577 Genomic DNA. Translation: ABN75959.1.
RefSeqiWP_011840643.1. NC_009049.1.
YP_001042731.1. NC_009049.1.

3D structure databases

ProteinModelPortaliA3PHZ3.
SMRiA3PHZ3. Positions 3-424.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349101.Rsph17029_0848.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN75959; ABN75959; Rsph17029_0848.
GeneIDi4896626.
KEGGirsh:Rsph17029_0848.
PATRICi23169382. VBIRhoSph114483_1003.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiGQRLTNT.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciRSPH349101:GHC8-865-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Rhodobacter sphaeroides ATCC 17029."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.
    , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P., Mackenzie C., Choudhary M., Donohue T.J., Kaplan S.
    Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17029 / ATH 2.4.9Imported.

Entry informationi

Entry nameiA3PHZ3_RHOS1
AccessioniPrimary (citable) accession number: A3PHZ3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: January 7, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.