A3PEX5 (A3PEX5_PROM0) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Possible deoxyribonuclease, TatD family EMBL ABO18300.1

Gene names

Name:	tatD EMBL ABO18300.1
Ordered Locus Names:	P9301_16771

Organism

Prochlorococcus marinus (strain MIT 9301) [Complete proteome] [HAMAP] EMBL ABO18300.1

Taxonomic identifier

167546 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus

Protein attributes

Sequence length	264 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	endodeoxyribonuclease activity, producing 5'-phosphomonoesters Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3PEX5 [UniParc]. Last modified April 3, 2007. Version 1. Checksum: 797954D223473712	FASTA	264	30,175
	10 20 30 40 50 60 MSNIELIDSH CHLIFENFER DLEDVVSRLR SKGIKKLVHA CCELTEIPKL KKISHEFNEI 70 80 90 100 110 120 YYSVGLHPLE AKKWEQSSKS LLRKSALEDR RVVAIGELGL DFFKNENKTQ QIEALIPQME 130 140 150 160 170 180 LAYELKLPVI IHCRDAANEM IEICSDLSNK GKCPDGVLHC WTGTPNEMKQ FLDLGFYISF 190 200 210 220 230 240 SGIVTFPKAH EIHECAKIVP NDKYLIETDS PFLAPVPHRG KRNEPAFVEN VAKFMADLRS 250 260 TELNTIAKES SKNAEDLFKF DLLI

References

[1]

"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus." Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W. PLoS Genet. 3:2515-2528(2007) [PubMed: 18159947] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000576 Genomic DNA. Translation: ABO18300.1.
RefSeq	YP_001091901.1. NC_009091.1.
3D structure databases
ProteinModelPortal	A3PEX5.
ModBase	Search...
Protein-protein interaction databases
STRING	A3PEX5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4912531.
GenomeReviews	Gene locus P9301_16771 in contig CP000576_GR.
KEGG	pmg:P9301_16771.
PATRIC	22996855. VBIProMar103344_1602.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0084.
HOGENOM	HBG629833.
OMA	LPLVIHT.
PhylomeDB	A3PEX5.
ProtClustDB	CLSK892795.
Enzyme and pathway databases
BioCyc	PMAR167546:P9301ORF_1709-MONOMER.
Family and domain databases
InterPro	IPR012278. DNase_TatD. IPR015991. DNase_TatD_bac-type. IPR001130. TatD_superfamily. [Graphical view]
KO	K03424.
PANTHER	PTHR10060. TatD_DNase. 1 hit.
Pfam	PF01026. TatD_DNase. 1 hit. [Graphical view]
PIRSF	PIRSF005902. DNase_TatD. 1 hit.
TIGRFAMs	TIGR00010. TIGR00010. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3PEX5_PROM0

Accession

Primary (citable) accession number: A3PEX5

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	April 3, 2007
Last modified:	January 25, 2012
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)