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Protein

Glycogen synthase

Gene

glgA

Organism
Prochlorococcus marinus (strain MIT 9301)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathway: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciPMAR167546:GH1Y-655-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:P9301_06351
OrganismiProchlorococcus marinus (strain MIT 9301)
Taxonomic identifieri167546 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000001430 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 483483Glycogen synthasePRO_1000014373Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi167546.P9301_06351.

Structurei

3D structure databases

ProteinModelPortaliA3PBY3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPVWMHQD.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

A3PBY3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRILLAAAEC APMIKVGGMG DVVGSLPPSL IKLGHDVRVI IPGYGKLWSL
60 70 80 90 100
LDVSNEPVFR ANTMGTDFSV YEAKHPIHNY VIYLVGHPTF DSDQIYGGEN
110 120 130 140 150
EDWRFTFFAS ATAEFAWNCW KPQVLHCHDW HTGMIPVWMH QDPEISTVFT
160 170 180 190 200
IHNLKYQGPW RWKLEKMTWC PWYMHGDHTM AAAMLYADRV NAVSPTYADE
210 220 230 240 250
IKTHEYGESL EGLLNYISGK LRGILNGIDL DEWNPAKDSV LPAKFSINNL
260 270 280 290 300
ENRQENKKIL QREMGLEVNP KKYLLGMVSR LVDQKGVDLL LQVSRRLLAY
310 320 330 340 350
TDSQIAVLGT GDRYLESGLW QLALDYPGRF SVFLTYDDSL SRLIYGGSDA
360 370 380 390 400
FLMPSRFEPC GISQLLAMRY GSIPIVRRVG GLVDTVLPHD PENNSGTGFC
410 420 430 440 450
FDRFEPIDFY TSLVRSWEAF RHKDSWKLLQ KRAMSQEFSW QRSALEYEIM
460 470 480
YKDVCGIKEP SPDVAEVEKF SYGQSADPSL KKV
Length:483
Mass (Da):55,066
Last modified:April 3, 2007 - v1
Checksum:i931BA23CE40BBE62
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000576 Genomic DNA. Translation: ABO17258.1.
RefSeqiWP_011862625.1. NC_009091.1.
YP_001090859.1. NC_009091.1.

Genome annotation databases

EnsemblBacteriaiABO17258; ABO17258; P9301_06351.
GeneIDi4911122.
KEGGipmg:P9301_06351.
PATRICi22994865. VBIProMar103344_0621.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000576 Genomic DNA. Translation: ABO17258.1.
RefSeqiWP_011862625.1. NC_009091.1.
YP_001090859.1. NC_009091.1.

3D structure databases

ProteinModelPortaliA3PBY3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi167546.P9301_06351.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO17258; ABO17258; P9301_06351.
GeneIDi4911122.
KEGGipmg:P9301_06351.
PATRICi22994865. VBIProMar103344_0621.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPVWMHQD.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciPMAR167546:GH1Y-655-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9301.

Entry informationi

Entry nameiGLGA_PROM0
AccessioniPrimary (citable) accession number: A3PBY3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: April 3, 2007
Last modified: June 24, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.